Brevibacillus choshinensis: JNE38_12555
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Entry
JNE38_12555 CDS
T07271
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bchs
Brevibacillus choshinensis
Pathway
bchs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JNE38_12555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bchs03019
]
JNE38_12555
03400 DNA repair and recombination proteins [BR:
bchs03400
]
JNE38_12555
Enzymes [BR:
bchs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNE38_12555
Messenger RNA biogenesis [BR:
bchs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JNE38_12555
DNA repair and recombination proteins [BR:
bchs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JNE38_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_22
SKI
Motif
Other DBs
NCBI-ProteinID:
QRG69875
UniProt:
A0ABX7FVS7
LinkDB
All DBs
Position
2457223..2458740
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AA seq
505 aa
AA seq
DB search
MNEQLLDNLQAHFGHSSFRPGQEDIISRVMEGRNVLAILATGGGKSITYQLPALLLPGIT
VVVSPLISLMMDQVQQLRTRRKIPATYLNSSQDYSESRDVLRELANGAYKLLYVSPEKLQ
QPYVQAVLKRVGVSLVAIDEAHCISQWGHDFRTDYLRLPDAIRQLGNPTVLAVTATATAD
VRHEIGKLFQIESSDMIVQALNRANIALDLIAAPDEGERREQVLRMMDELEGPGIVYCST
RQAVEVLVASYQLEGSKRIHGYHGGMESMERVLIQSQFLADELDVIIATNAFGMGIDKPN
IRYVIHYQMPASMEAYAQEIGRVGRDGGPGYAVLFHVSEDLQIHQHMVEKEYPTQLQVMQ
FYQWAQTAKDKPGSEALAAVDLTEEMVQLLTFYTEQAGLSAEVAATTEEMQDHVRRIWEQ
TEKRKRLKKQKLFEMLSYVEGTDDCLRKKLNRYFGEDQTAYSLYCCSRCGLEKQAYEGKS
SVAHGKNLENSWDLRQALEYLLPKN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcagctgctggataatttgcaggctcattttggtcatagctcgtttcgacca
ggccaggaagacatcatctcgcgtgtaatggaaggaaggaatgtgctggcgattctcgcg
acgggcggcgggaaatccatcacgtaccagctgcctgccttgcttttgccgggaatcacg
gtagtggtatcgccgctcatttcgctcatgatggatcaagtacagcaactgcgcacgcgc
agaaaaatccctgcgacctatctgaatagctcccaggattacagtgaatcgcgggatgtg
ctgcgagagcttgcgaatggagcgtacaagctcttgtatgtgtctcccgaaaaactccag
cagccctacgttcaagcagtgctaaaacgcgtgggagtttcgctggttgcgattgatgaa
gcgcattgtatttcccaatggggtcacgattttcgcacggattatttacggcttccggac
gcgatccggcaattgggaaatccgaccgtgcttgcggtcactgcaacagctactgcggat
gtccgccatgaaatcgggaagctcttccagatcgaatccagcgacatgatcgtacaggcg
ctcaatcgggcaaacatcgccctagatctgattgctgcgccagacgagggcgagcgcagg
gagcaagtgctgagaatgatggacgagctggagggtccgggtatcgtttattgcagcaca
cgccaagcagtcgaagtcctcgttgcctcgtatcagctggagggtagcaaaaggattcac
ggctatcatggcgggatggagagcatggagagggtcctcatacaatcgcagtttttggca
gacgaactggatgtgatcatcgcgaccaatgcatttggcatggggattgacaagcccaat
attcgttacgtgatccattatcagatgcctgccagcatggaggcgtacgcccaggaaatc
ggacgtgtcggccgagatggaggaccgggatatgccgttctctttcacgtaagcgaggac
ttgcagattcaccagcacatggtggagaaagaatacccgacgcaattgcaggtcatgcaa
ttttaccaatgggcccaaacggcgaaggacaaacccgggagtgaagctttggcggcagtc
gacctgacagaagaaatggttcagcttcttacgttttacactgaacaagcaggattatcc
gcagaagtggcagcgacgacagaggaaatgcaggatcatgtgaggagaatttgggaacag
acggaaaagcgcaaacggttgaagaaacaaaagctgttcgaaatgctgtcttatgtagaa
ggaacggatgattgcttgcgcaagaagctgaatcgctatttcggcgaagatcagactgcg
tattccttgtactgctgctcgcgctgcggcttggagaaacaagcttacgaggggaaatcc
tcagttgcgcatggaaagaatctcgaaaactcttgggatttgaggcaggcgttggagtat
cttttgccgaaaaactaa
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