Brevibacillus choshinensis: JNE38_21155
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Entry
JNE38_21155 CDS
T07271
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bchs
Brevibacillus choshinensis
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bchs03019
]
JNE38_21155
Messenger RNA biogenesis [BR:
bchs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JNE38_21155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QRG66063
LinkDB
All DBs
Position
complement(4209372..4210316)
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AA seq
314 aa
AA seq
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MKYLMEYLEGERVIAFCLVKSKESGVASNQSEYLNLELGDRSGTIMAKLWDVSSELKEGI
AVKSVVKIDATVQNYRGKKQLVIQRIRPASPSDEVVMESLIPISPVPVNELWEKLMMTVE
SLQCKTLQAIIKDALSDEEISERLRHYPAGVRMHHNYYHGLLEHIVSLLTAAERLLPLYP
QVDRDVLYATCIMHDIGKLYELSDPIAPDYTTPGQLIGHLVMGAEIVSGICRKLDIPLGD
AEVLHLKHCILSHHGEVENGWGSAVSGKTPTAVLFHYLDQIDSKMNALGQTLADAGEEEW
SYAGVLRRKVWRGY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctgatggagtatctggagggagagcgggttatcgcgttttgcctcgtgaaa
tcaaaggaaagcggagtggcgagcaaccagagcgaatatctcaatctggagctcggcgat
cggtccggcacgatcatggccaagctgtgggatgtaagcagcgagctgaaggaagggatc
gcggtcaaatccgtcgtcaaaatcgatgctaccgtacagaattatcgagggaagaagcag
ctggtgatccagcgaatcagacccgcgtccccttcggatgaggtggtcatggagtcgctg
attccgatttcacctgtacctgtgaacgagctgtgggaaaagctgatgatgaccgtggaa
agtttgcagtgcaaaacgctgcaggctatcatcaaggacgcattgtccgatgaagagatc
agtgagcgattgcgccactatcctgcaggcgttcgcatgcatcacaactactaccacgga
ctgctcgagcacatcgtctcgcttttgactgcagcggagaggcttttgccgctctatccg
caggtggacagggatgtgctgtatgccacctgcatcatgcacgacatcggaaagctgtac
gagctgtccgatccgatcgcgcccgattacacaacgccagggcaattgattggacacttg
gtcatgggggctgagatcgtgagcgggatatgccgaaagctcgacattcctttgggtgat
gccgaggtcctgcacttgaagcactgtatcctcagtcaccatggtgaagtggagaatgga
tggggaagtgccgtatctggcaagacgcctacagcggtcctcttccattacctcgaccag
atcgacagcaagatgaacgccttggggcagacattggctgatgctggcgaggaagaatgg
tcctatgcaggagtgctcagaagaaaagtatggcgcggctattaa
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