Brevibacillus choshinensis: JNE38_22845
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Entry
JNE38_22845 CDS
T07271
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bchs
Brevibacillus choshinensis
Pathway
bchs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JNE38_22845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bchs03019
]
JNE38_22845
03009 Ribosome biogenesis [BR:
bchs03009
]
JNE38_22845
Enzymes [BR:
bchs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JNE38_22845
Messenger RNA biogenesis [BR:
bchs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JNE38_22845
Ribosome biogenesis [BR:
bchs03009
]
Prokaryotic type
rRNA helicases
JNE38_22845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QRG66351
UniProt:
A0ABX7FM48
LinkDB
All DBs
Position
complement(4543992..4545485)
Genome browser
AA seq
497 aa
AA seq
DB search
MAKSFASFGFRPELMQGIQDLYYKEPTAIQEEAIPLILEGKDVIGQAQTGTGKTAAFMLP
ILNALEEGKRDIQALILTPTRELSIQIAKEVEKLGKHLNVNVLSLHGGTDIDRQLNKLKE
TVHIVVGTPGRVLDHMKRGSLHFGRISTLVLDEADKMMEMGFLEDVEQVVVHTPSQRQVL
LFSATMPDLVKKLAHRFMKQPPHIKIEGKQKTVERIEQFYYVVNQSDKTDALVDVLEQEQ
PFLTIIFANTQVRVQQLTARLQENGLSAQALYGDLSQNKREQLMKQFREIRFQFLIATDI
AARGLDVEGVTHVINYDLPNDVESYIHRVGRTGRAGQKGKAISLISPRQKNLMGRFAKTT
KANIEERILQAGRHLDAGRRQRAEEREAHFIELRAQQQKEQQKEKDKEFAPIREAIKKKT
KVKPGYKKKLARELDELQTKYEQNRKRAEAIAARKAGKTAKPAAAGKAGKGTGGRPGGKS
QGAKPFRPSAGKGKSRG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgtttgcgtcttttggctttcgaccggagctgatgcaagggattcaagac
ctgtattataaagaaccaaccgctattcaagaagaagcgattccgctgattctggaaggc
aaggacgtgatcggacaagcacagacggggactgggaaaaccgctgcgtttatgctgccg
attctgaatgctctggaggaagggaagcgcgatatccaagcactgatcctgactccgacc
cgcgagctgtccatccagatcgccaaggaagtagagaaactgggcaagcatttgaatgtc
aatgtgctctcactgcacggaggtacggatatcgacaggcagctcaacaagctgaaggag
accgtgcatatcgtagtcggtacgccagggcgcgtgcttgaccatatgaagcgcgggtcg
ctgcacttcggccgcatttccaccctggttttggacgaagctgacaaaatgatggaaatg
ggcttcctcgaggatgtagaacaggtggtcgtccatacgccatcgcagcgtcaagtgctg
ctgttttctgccaccatgcctgacttggtgaaaaagctggcgcaccgcttcatgaagcag
ccgccgcacatcaagatcgaaggaaagcaaaaaacggtggagcgcatcgagcaattttat
tacgtcgtcaaccaaagcgacaaaaccgacgcgctcgtggacgtgctggagcaggagcag
ccgtttttgacgattatttttgccaacacgcaggtgcgcgtccagcaattgaccgcgcgt
ctgcaggaaaacggactctccgctcaggcgctctacggcgatctgtcccaaaacaaacgg
gaacagctcatgaagcaattccgtgagatccgcttccagtttttgatcgcgacagatatc
gccgctcgcggtctggacgtggaaggcgtcacacacgtcatcaactacgatctgccgaat
gacgtggagagctacattcaccgtgtgggccgtaccggtcgcgcgggccaaaaagggaaa
gcgatctccctgatctcccctcgccagaaaaacctgatgggtcgctttgcgaaaacgacc
aaagccaacatcgaggaacgaatcctgcaagcgggacgccatctggacgcaggtcgtcgt
caacgggcggaagagcgggaagctcattttatcgaattgcgcgcccagcagcaaaaggaa
cagcagaaagaaaaagataaagaattcgcaccgattcgggaagcgatcaagaaaaagacg
aaagtcaaaccgggctacaagaaaaagctcgcgcgtgagctggatgagctccagacgaaa
tacgagcaaaaccgcaagcgtgcggaagcgatcgcagcgcgtaaggcaggaaaaacagca
aaaccggcggcagctggcaaggcagggaaaggcacaggaggcagaccaggcggcaaaagt
cagggtgcaaagccgtttcgaccttctgcaggaaaaggcaaatcccgaggctaa
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