Baumannia cicadellinicola Hc (Homalodisca coagulata): BCI_0188
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Entry
BCI_0188 CDS
T00349
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bci
Baumannia cicadellinicola Hc (Homalodisca coagulata)
Pathway
bci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCI_0188 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bci03021
]
BCI_0188 (rho)
03019 Messenger RNA biogenesis [BR:
bci03019
]
BCI_0188 (rho)
Transcription machinery [BR:
bci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BCI_0188 (rho)
Messenger RNA biogenesis [BR:
bci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCI_0188 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABF14217
UniProt:
Q1LTR9
LinkDB
All DBs
Position
complement(200830..202089)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELIIIGEKMGLENIARMRKQDIIFATLKQHAKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANLRLRMERGNGSTEDLTARVLDLASPIGCGQRGLIVAPP
KAGKTMLMQNIAQSITYNYPNCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVMILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNIEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMCEIDAMEFLMNKLAMTKTNDEFFDMMKRY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaccgaattaaaaaatacgccagtttcggagttaataataatcggcgaaaag
atgggactagaaaacatagcacgcatgcgaaaacaagacatcatcttcgccacactaaag
caacacgctaaaagtggagaagatatttttggcgatggcgtactcgaaatactgcaagat
ggatttggctttctacgttctagtgatagttcctacttagccggcccagatgatatatat
gtttctcccagtcaaattcgccgttttaacttacgtacaggtgatactatttctggtaaa
attcgtccaccaaaagaaggtgaacgatacttcgcactattaaaagttaatgaggttaat
tacgataaaccggaaaatgcccgtaataaaattttattcgaaaatttgactccgttgcat
gctaatttacgtttgcgtatggaacgtggaaacggttcgacagaagatttaaccgctcgc
gtgctagatttagcatcgcctattgggtgtggtcaacgtggtctgatagtagctccgcca
aaagctggtaaaacaatgcttatgcaaaatattgcacaaagtattacctataattatcct
aattgtgtgctaatagttttattaattgatgaacgcccagaagaagttacagaaatgcag
cgtctcgtgaaaggtgaagttattgcttcaacatttgatgaaccggcagcgcgacatgtg
caagtcgcagaaatggttatcgagaaagcaaagcgtctcgtagagcataaaaaagatgta
atgatattattagattctattactcgtttggctcgggcatataatacggtagtacctgcc
tcaggtaaggtattaacgggtggtgtagatgctaacgctttgcatcgtcctaaacgattt
tttggggctgctcgcaatatagaagagggtggtagtttaactattatagctaccgcatta
attgataccggttcaaaaatggacgaagtgatttacgaagaatttaaaggtacgggtaat
atggaattacatttatcacgtaaaattgcagaaaaacgtgtattcccggctatcgactat
aaccggtctggtacacggaaagaagaattgcttactactcaggaagaactacagaaaatg
tggattttacgtaaaattatccatccaatgtgtgaaatagatgcaatggaattcttgatg
aataagttagcaatgactaaaactaacgatgaattttttgatatgatgaaacgttattaa
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