Baumannia cicadellinicola Hc (Homalodisca coagulata): BCI_0297
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Entry
BCI_0297 CDS
T00349
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bci
Baumannia cicadellinicola Hc (Homalodisca coagulata)
Brite
KEGG Orthology (KO) [BR:
bci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bci03016
]
BCI_0297 (rnb)
Enzymes [BR:
bci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BCI_0297 (rnb)
Transfer RNA biogenesis [BR:
bci03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BCI_0297 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ABF14302
UniProt:
Q1LTG8
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All DBs
Position
317059..318996
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AA seq
645 aa
AA seq
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MFQDHPLLIQLKQQLYDKELRMVGVVKSTDKGFGFLEVNAQKSYFIPPLFMKKVMHGDKI
SAVLRIVNNRAIAEPETLIEPFLSRFVGKVQIKNDKLALLPKHPLIKEIIPASQPRSMKN
TQLCHGDWVIAEMCHHPLDGYRYFYAKITELITTKDDNFAHWRVTLAHYNLEREAPAMPK
YLTIQDNGLIREDLTELNFITIDHASTEDIDDALHVAYGTNGALVLTIAIADPTAWIIAG
SQLDCIARDRAFTNYLPGFNIPMLPRMLSEDLCSLRAYEKRPALVCQVTMQHDGTLNEDM
RFFAAWIESKAKLSYDEVSDWIENIGFWQPQNNAIAEQIRMLHIVCQARSSWRKQHALVF
KDKPDYRFILEENGNVKNIIAEPRRIAKRMIEEAMITANICAARVLRDNLGFGLYNTHNG
FDTTLIDQVVAILQKHNISVDATQLLTLEGFCALRRKLNTMSTSYLDSRIRRFQTLSELK
TEPGPHFGLGLEVYATWTSPIRKYSDMMNHRLLKALIGAGKAERPKTDITFRMSERRRQN
RIAERDVEDWLYASFLKNQVGSHIRYSAEIIDIYRNGMRIRLLDNGAIAFIPALLIHNIR
DELICNQDIGIVQIQGKERYRQGDTIEVYIKEVHIDNRSIIAKIV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagatcacccactgctaatacagctcaaacagcaactatacgacaaagagcta
cgcatggtaggtgtagttaaaagcactgataaaggatttggctttcttgaagttaacgca
caaaaaagctattttattcctccactttttatgaaaaaagtaatgcatggtgataaaatt
agtgctgtgttgcgtattgtaaataatcgcgctattgctgaaccagaaactttaattgaa
ccttttttatctcgttttgttggtaaggtgcaaattaaaaacgataaactagcactttta
cctaaacatccactgattaaagaaattattccagctagtcagccgcggagtatgaagaat
actcaactatgccatggagactgggtcatagcagaaatgtgtcaccatcctttagatggg
tatcgttatttttatgctaaaattactgagctaattactactaaagatgataattttgcc
cactggagagtaactcttgctcactataatttagaacgtgaagcacctgctatgccaaaa
tatctcacaatacaagataatggtttaattcgcgaagatctaacagaactaaactttatt
actattgatcatgctagcaccgaagatatagatgatgcgttacatgttgcttacggaaca
aacggagcattagttcttactatagctattgcagatcctaccgcatggattatcgccggt
agtcaattagattgcatagctcgcgatagagcttttacaaactatcttcctggctttaat
atcccaatgttaccaaggatgttatctgaagatttatgttctttacgtgcatatgaaaaa
cgaccggctttagtctgccaagttactatgcagcatgatggaacactaaatgaagacatg
cgtttttttgcggcttggatagaatctaaggctaagcttagctatgatgaagtatctgat
tggatagaaaatattggtttttggcaaccgcagaataatgctattgcagaacagattaga
atgttgcatatagtttgccaagctcgcagttcttggcggaaacaacatgctttagtattt
aaggataaacctgactaccgttttattttggaagaaaatggtaatgtgaagaatattatt
gctgaaccacgtcgtattgctaaaagaatgattgaagaggctatgattaccgcgaatata
tgtgctgcacgtgttctacgtgataatcttggttttgggttatataatacccataatggt
ttcgatactactcttattgatcaagtagtagctattttacaaaaacataatatttcagta
gatgctactcaattactgaccctagaaggattctgtgctttacgtcgtaagttaaatact
atgtcaacctcatatttggatagtagaattcgtcgctttcagaccttatcagagttaaaa
actgaacctggacctcattttggtctaggattagaggtttatgctacgtggacttcacct
attcgaaaatatagcgatatgatgaatcatcgtttgctgaaagccttaataggagccggt
aaagcagaacgaccaaaaacagacattactttccgtatgtctgaacgtaggaggcaaaat
cgcattgctgaaagggatgtagaagattggctatatgctagttttttaaaaaatcaagta
ggaagtcatattcgttatagtgctgagattattgatatttatcgtaatggtatgcgaatt
agactactagataatggtgctattgcttttatccctgccttattaattcataacatacgt
gatgaattaatttgtaaccaagatattggcattgtccagattcaaggcaaagaacgttac
cgacagggggatactatagaagtatatattaaagaagtgcatatagataatcgttctatt
attgcgaaaattgtctaa
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