Baumannia cicadellinicola Hc (Homalodisca coagulata): BCI_0626
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Entry
BCI_0626 CDS
T00349
Symbol
deaD
Name
(GenBank) inducible ATP-independent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bci
Baumannia cicadellinicola Hc (Homalodisca coagulata)
Pathway
bci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCI_0626 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bci03019
]
BCI_0626 (deaD)
03009 Ribosome biogenesis [BR:
bci03009
]
BCI_0626 (deaD)
Enzymes [BR:
bci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCI_0626 (deaD)
Messenger RNA biogenesis [BR:
bci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCI_0626 (deaD)
Ribosome biogenesis [BR:
bci03009
]
Prokaryotic type
rRNA helicases
BCI_0626 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABF13940
UniProt:
Q1LSL3
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All DBs
Position
complement(657363..659138)
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AA seq
591 aa
AA seq
DB search
MSVVNTSFAKMGLNILLLNALKDLGYETPSPIQAECIPHLLAGRDVLGIAQTGSGKTAAF
ALPLLHNINLKLNAPQVLVLAPTRELAVQVSEAYSDFAKYMKGINVVALYGGQRYDVQLR
LLRQGSQVIVGTPGRLLDHLKRGTLDLSHLHGLVLDEADEMLRMGFIEDVENILAQIPAK
HQTALFSATMPEAIRRITRRFMTEPKEVHIESNIANRPDISQSYWTVHGRCKNKALARFL
EVEDFDAAIIFVRTKNATLEVSQSLEQNGYNSAALNGDMNQALREQTLSRLKNGSLDVLI
ATDVAARGLDVDRISLVVNYDIPLDSESYIHRIGRTGRAGRAGRALLFVEQRERRLLRNI
ERLMKLNIPEVQLPTAEKLNTRRLEKLAVKIKNHLKNRDIGMYREMLTRLQQTEKLDIDI
ETLAAVLLKMAHGQRPLILSPEPVIERRLHSNSRRYNNRERIDVSKMDLYRIEVGRNDGV
EVRHIVGAIANEGDINSSYIGNIKLFASHSTIELPKGIPGXILSHFTRTRIMNKPINLQL
FDEASSARCVERYGIRRSNLVHEKRIGNRGVSEVRERRVSRHSFRTQRNNG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagttaatacatcttttgcaaagatgggattgaatattcttctccttaatgcc
cttaaagatctaggttatgaaacaccatcgcctattcaggctgagtgtattccgcactta
ttagctggtcgtgatgttctgggtattgctcaaacaggtagtggtaaaacagcagcattt
gctctaccactactacataatatcaatctaaagttaaatgctccgcaggtattagtttta
gctcctactcgtgaacttgctgttcaagttagtgaagcctactctgattttgctaaatat
atgaaaggaatcaatgttgttgctttatatggtgggcagcgctatgatgtacagttacgt
ttgttacgccaaggttcacaagtaatagttggaacacctggtagattactcgatcatctt
aaacgtggtacattggatttatcccatcttcatgggttagtattagatgaagccgatgaa
atgcttcgtatgggatttatcgaagatgtagaaaatattttagcgcaaattcctgctaaa
caccaaacagcgctcttttcagctactatgccagaagctattcggagaattacccgccgt
ttcatgacagagccaaaagaagtacatatagaatctaatatagctaatcgtcccgatata
agtcaaagttactggacggtgcatggtaggtgtaaaaataaagcactagctcgtttcctt
gaagtagaagattttgatgctgccattattttcgtacgaactaaaaatgcaactttagaa
gtatctcaatcattggaacaaaatggctataatagtgccgcattaaacggggacatgaat
caagcactaagagagcaaactcttagtcgcctaaaaaatggtagtctagatgttttgata
gcaacagatgttgctgctcgtggtttagatgttgatcgtattagcctagtggttaactat
gatatacctctagattcagagtcttatatacaccgtataggacgtactgggcgtgcaggt
agagcaggacgtgctctattgttcgtagagcaacgtgaacgccgtttattgcgtaatatt
gaacgtcttatgaaactcaatattccagaagttcagctaccaacagctgaaaaacttaat
acccgtcgtttagaaaaattagctgtaaaaataaaaaatcatcttaaaaatagagatatt
ggtatgtatcgagagatgctaactagactacaacaaacagaaaagctagatattgatata
gaaacactagcagcggtgctcttgaaaatggcacatggtcaacgtccattaattttatca
ccagaacctgttattgaacgacgtttacatagtaattcacgtcgatataataaccgtgag
cgtatagatgttagtaaaatggatctataccgcattgaagtaggtcgtaatgatggtgta
gaagtacgtcatattgttggtgctatagcaaatgaaggagatattaatagtagctacatt
ggtaatattaagctattcgcatcacactctacgatcgagctaccaaaaggtataccagga
gakattttatctcattttacccgtactcgtattatgaataagcctattaatctacaactg
ttcgatgaagcatcatcagcacgatgtgttgaacgttatggtattcgtcgtagtaatcta
gttcatgaaaaacgtatagggaataggggagtatcagaagttcgtgagcgtcgtgtaagc
cgtcatagtttccgtactcagcggaacaatggttaa
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