Candidatus Palibaumannia cicadellinicola BGSS: IM45_007
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Entry
IM45_007 CDS
T03277
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib00260
Glycine, serine and threonine metabolism
bcib00630
Glyoxylate and dicarboxylate metabolism
bcib00670
One carbon pool by folate
bcib00680
Methane metabolism
bcib01100
Metabolic pathways
bcib01110
Biosynthesis of secondary metabolites
bcib01120
Microbial metabolism in diverse environments
bcib01200
Carbon metabolism
bcib01230
Biosynthesis of amino acids
bcib01240
Biosynthesis of cofactors
bcib04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IM45_007
09102 Energy metabolism
00680 Methane metabolism
IM45_007
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IM45_007
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IM45_007
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IM45_007
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IM45_007
Enzymes [BR:
bcib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IM45_007
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Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIN46890
UniProt:
A0A088MX25
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Position
6563..7816
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AA seq
417 aa
AA seq
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MLKRDIKIANYDADLWWAMEQEVIRQEEHIELIASENYTSPRVMQAQGSLLTNKYAEGYP
SKRYYGGCAFVDIVEKLAIERAKALFSADYANVQPHSGSQANFAVYTTLLQPGDTVLGMN
LSHGGHLTHGSPVNFSGKMYNVISYGVDKNGYINYDQLTELAMTHKPKMIIGGFSAYSRV
VNWARMRQIADSISAFFFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLAGPRGGLII
AQGGSEEMYNKLNSAVFPGAQGGPMMHVIAGKAVALKEAMEPEFKKYQQQVIINAKVMVN
IFLNRGFNVVSGGTDNHLFLLNLVDKNITGKEADLALGRANITVNKNSVPNDPKSPFITS
GIRIGTPAVTRRGLNETDVHNLASWICDVLENINNESVIQSTKKKVLDICARYPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacgtgatataaagattgctaattacgatgcagatttatggtgggcaatggag
caagaagttatacgtcaggaagaacatatcgaattgattgcatctgaaaactatactagc
ccgcgggtaatgcaagcacaaggttccttactaactaataaatacgctgaaggttatcct
agtaagcgttactacggtggttgtgcattcgtggatatagtagaaaaattagctatagaa
cgtgctaaagcattatttagtgctgattatgctaatgtacaaccacattctggttcacaa
gctaattttgctgtctatacaacattattacagccgggcgatacagtactagggatgaat
ctttcccacggcggtcacttaactcacggctcacctgtaaacttttccggaaaaatgtat
aacgttatctcttatggtgttgataaaaatggttatattaactacgatcagctaactgaa
ctagcgatgacacataagcccaaaatgattatcggcggtttttctgcttattctcgtgtg
gttaattgggctagaatgcgacaaattgctgatagtattagtgcttttttctttgttgat
atggcgcatgttgccggccttgtagctgctggtgtttatcctaatccagtgccttatgcc
gatgtagtaactactacaacacataaaaccctagctggtccccgcggcggattgattatc
gctcaaggcggtagtgaggaaatgtataataagcttaattcagcagtgttccctggtgcg
caaggcggtccaatgatgcatgtaatagcaggaaaagcagtcgcactaaaagaagctatg
gagccagaatttaaaaaatatcagcaacaggtaataataaatgccaaagtaatggttaat
atttttttgaatcgtggttttaacgtagtatctggtggtacggataaccacctcttttta
ctaaatttagttgataaaaatatcaccggtaaagaggctgatttagctctaggtcgtgct
aatattactgttaataagaacagtgttccaaatgatccaaaaagcccatttataacatct
ggtattcgtattgggactccggctgtgacccgccgtggtttaaatgaaacagatgtacat
aatttagctagctggatatgtgatgtgctagaaaatattaataacgaatctgtgattcag
tctactaagaaaaaagtgctggatatctgcgctcgctatccagtctatgcgtaa
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