Candidatus Palibaumannia cicadellinicola BGSS: IM45_1205
Help
Entry
IM45_1205 CDS
T03277
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM45_1205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcib03400
]
IM45_1205
Enzymes [BR:
bcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM45_1205
DNA repair and recombination proteins [BR:
bcib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM45_1205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIN47467
UniProt:
A0A088MYT2
LinkDB
All DBs
Position
630668..634042
Genome browser
AA seq
1124 aa
AA seq
DB search
MFTIYHSNQLDLLKTLTARLISHCQLRDPLQPEVILVQSYGMAQWMQMELAVSFSIAANI
NFSLPASFIWKMFTCVLPDVPAESMFSKSAMTWRLMTIMQRFYNQPNFDVIGEYLRDDVD
KRKQFHFAARVADLFDQYLVFRPDWLERWQHGKLLDNLGEDQRWQAKLWQALIEDISSTN
IFLWHRANLYQCFINTLMQSAKRPPGLPDRIFLCGISSLPPTYLQALQALGNHIDIHFMF
INPCRYYWGDIRNNTCLTLPLLQGHYQTLTLNDQRDQPTGNPLLASWGKLGRDTLYMLSQ
LNNVQEVEAFVESSGKECLLSLLQQDILEDYTVYRVHSDMPNYTKSKRLLQLTDRSLSIH
LCHSPQREIEVLHDSLLNIMALETYILPREVIVMVADIDLYTPAIQAVFGNAVADRYLPF
AISDRQVRHIHPVLPVFLSLLELPRSRFTAEQVLALLEIPTLAARFSISKEHLKLLRQWV
AESGIRWGLDDDTQRDLMLPATGQHTWQFGLNRMLLGYAMESKSGAWQGILPYDESSGLI
AELVGKLAELLMILRRWRNNLAKPRQLKEWLTCASDIIKDFFIPEVEFEAETALAIVVNN
WQQMLQLGIEANYDQLVPITILYDELIIRLKKERTSQRFLAGHINFCTIMPMRSIPFKVV
CLLGMNDGVYPHSKLPVGFDLIAQQPRCGDRNRRDEDRYLFLEALLSAQQRLYISFIGRA
IQDNTPRYPSVLVRELTDYIAQSFYLPGDEQLDEETSAMHVRTQLWQWHSRMPFAPENFI
PGSENHSFAKEWLGAAKVKASCDVEGKPPNFIRLLKGKSEDVLLLDNLHRFYNHPVRAWF
QQRLAIWFCKEPQDIAEAEPFTITGINRYQINEILLKTLIEEKDLDVLYQKVRAAGLLTY
GAFGKLYWTKQCHKMTILADNIRRFLLPEPRSQEVILTIGNTELTGWLSQVQDNGLLRWR
PSYLAMKDGLQLWIEHLAYCAMGGKGESRMFGTNSQWHFLAVSAEEAQKYLQIIVNGYWQ
GMSEPLFLLNRSGGAWLHYCFNRKTRTINWEENCQREARDKMMQAWQGDKFFPGENSDPY
LQRLIREFNEKDIIATIKAAESYFLPLLKRNIADIIKYDSKENQ
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttcactatttatcattctaaccaactagatttgctaaaaactctaactgctagatta
atatctcactgtcagctacgtgatccgctacaaccagaagtaatattggtgcagagctat
ggtatggcacagtggatgcagatggagttagcggtctcatttagtattgcagctaatatt
aacttttccttacctgcaagtttcatctggaaaatgtttacctgtgtactaccagatgtt
cccgccgaaagtatgttctctaagtcagcaatgacttggagattaatgacaatcatgcag
cgtttttacaatcaacctaattttgatgtgattggtgagtatctacgtgatgacgtagat
aagcgcaaacagtttcattttgcagcacgtgttgcagatctctttgaccaatatcttgtc
tttcgccccgactggttagaaagatggcagcatggtaaactactggataatttaggtgag
gatcaacgctggcaagctaagctgtggcaagcattaatcgaagatatttctagtacaaat
attttcttatggcatcgtgctaatttatatcagtgcttcattaataccctaatgcaaagt
gcaaaacgtccaccaggattgcctgataggatatttctttgcggaatttcttcactacca
cctacttatttgcaagcactacaggcgctgggcaaccatatagatattcatttcatgttc
ataaatccctgccgttactactggggagacatacgtaataatacgtgtctcaccctaccc
ctactacaaggacactatcagacgctgacacttaacgaccaaagagatcagccaacaggt
aatcctctattagcatcttggggtaaactaggcagagatactttatatatgttatctcag
ctaaataacgtgcaggaagtagaagcttttgtcgaatcatctgggaaagaatgcctgctt
agtttattacagcaagatatactagaggactatacggtgtatagagttcactctgatatg
ccgaattataccaagagcaaaagattgctacaacttacagatcgttctctaagtatacac
ctttgccatagtccacagcgagaaatagaagttttacacgatagtctactgaatattatg
gcgctcgaaacatatattttaccgcgtgaagtaattgtcatggttgctgatattgatctt
tataccccggctattcaggcagtattcggcaatgctgtagcagatcgttatctgccgttt
gctatttctgatcgtcaagtaagacatatccatccggtgttaccggtttttctcagtcta
cttgaactaccacgtagtagatttaccgctgaacaagtattagctctgctagagattcca
acgctagcagcccgtttctcgattagtaaagaacatttgaagttattacgtcaatgggta
gcagaatctgggattcgctgggggctcgatgatgatacccagcgtgatctgatgttgcca
gcaactggtcaacatacctggcagtttggtttaaaccgcatgttgttaggctatgcgatg
gagagtaaaagcggagcttggcagggaattctaccttatgatgaatcaagcggactaata
gctgaattggtaggcaagttggcggaactacttatgatattacgccgctggcgcaataac
ttagctaagcctcgtcagctaaaagaatggctaacctgcgcaagcgatataataaaagat
tttttcatcccggaagttgagttcgaagcggaaaccgcgctggcgatcgtagtaaataac
tggcagcagatgctgcagcttggtatcgaagcaaattatgatcaactcgtaccaattact
atactatatgatgaactaatcatacgtcttaagaaagaacggacaagccaacgttttctg
gcaggtcacataaacttttgtaccattatgccaatgcgctcgattccttttaaagtagtt
tgtctgctcggaatgaacgacggtgtatacccgcattctaagttaccggtaggtttcgat
ttaattgcacagcagccgcgttgcggcgatcgtaataggcgcgatgaagatcgctatctt
tttcttgaagcattattatctgcccaacaacgactatacatcagttttattggtagggca
atccaagataatacgccacgctatccatcggtattggttcgtgagctaactgattatatt
gcacaaagtttttatctccccggtgatgaacagcttgacgaagaaacgagcgcgatgcat
gtgcggactcagttatggcaatggcacagtcgcatgccttttgcgcctgaaaattttata
ccaggtagtgaaaatcatagttttgctaaggaatggcttggagccgctaaagttaaagct
agttgtgatgttgagggcaagccaccaaattttattaggttactaaagggtaaatcagaa
gatgtgctgttgttagataatttgcatcgtttttataaccatccagtacgtgcctggttt
cagcagagactagctatttggttttgcaaagaaccacaagatatcgctgaagcagaacca
tttactataactggtattaaccgttatcagattaacgaaatactattaaagacactcatt
gaagaaaaagaccttgatgtattataccaaaaagtgcgtgcagctggtctactaacttat
ggtgcttttggcaaattatactggaccaaacagtgccataaaatgacgatattagcagat
aatatacgtagatttcttctgccggagccgcgtagccaggaagtcatattaactattggt
aacacagagctgactggctggttatcgcaagtgcaagataatggcttattacgctggcgt
ccgagttatcttgctatgaaagatggtttacaactatggatcgaacatcttgcctattgc
gctatgggcggtaagggtgaaagccgtatgtttggtaccaatagtcagtggcatttctta
gcagtctcagcagaggaagctcagaagtatttacaaattatagttaatggttattggcaa
ggaatgtcagagcccttatttttactaaatcgttcaggtggagcatggcttcattactgc
tttaaccgtaaaactaggactataaattgggaagaaaactgtcaaagagaagcgcgtgat
aaaatgatgcaggcttggcaaggagataaattttttcctggtgaaaatagcgatccctat
ttacaacggctaatacgtgaatttaatgaaaaagatattatagcaacaattaaagcggca
gagtcttattttctaccactgttaaagcgtaatattgcggatattatcaaatatgactca
aaggaaaatcaataa
DBGET
integrated database retrieval system
