Candidatus Palibaumannia cicadellinicola BGSS: IM45_1287
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Entry
IM45_1287 CDS
T03277
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IM45_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcib03019
]
IM45_1287
03009 Ribosome biogenesis [BR:
bcib03009
]
IM45_1287
Messenger RNA biogenesis [BR:
bcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IM45_1287
Ribosome biogenesis [BR:
bcib03009
]
Eukaryotic type
Pre-60S particles
RNases
IM45_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIN47507
UniProt:
A0A088MYX0
LinkDB
All DBs
Position
complement(679307..679927)
Genome browser
AA seq
206 aa
AA seq
DB search
MNIDIIEILYQIIYKISCDKHIMPVNDNNLIWIDLEMTGLDPTHDRIIEVATLITDTDLN
VIAEGPVLAVHQCEAQLTLMDEWNTRTHTTSGLVERVRNSTLNEETAVAQTLTFLKEWVP
AGKSPICGNSIGQDRRFLYRYMPALEAYFHYRYLDVSTLKELARRWRPEIMVGLKKKNSH
KALDDIRESVAELVYYRAHFIRLEPN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgatataatagaaatattatatcagatcatctataaaatctcttgtgacaaa
cacattatgccggtaaatgacaataacttaatatggatagatctagaaatgactggtctt
gatcctacacatgatcgtattattgaagttgctacattaatcactgatactgatttaaac
gtcatagctgaagggccagttttagcagttcatcagtgtgaagctcaactaacgttaatg
gatgaatggaatacccgtacccatactactagtggattagtggaaagagttcgtaatagt
acgttaaatgaagaaacagcagtagcacaaacgcttacttttttaaaggagtgggtacca
gctggtaaatcgccaatctgtggtaatagtattggtcaagatcgacgttttctctatcgt
tacatgccagcactagaagcttattttcattatcggtacctagatgtcagtaccttaaaa
gaacttgctcgccgatggcgtccggaaattatggtaggtctgaagaaaaaaaacagccat
aaggctctggatgatattcgtgagtcagtggcagaattagtttattatcgcgcacatttt
atccgtcttgagcctaattga
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