Candidatus Palibaumannia cicadellinicola BGSS: IM45_1342
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Entry
IM45_1342 CDS
T03277
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM45_1342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcib03400
]
IM45_1342
Enzymes [BR:
bcib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IM45_1342
DNA repair and recombination proteins [BR:
bcib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IM45_1342
Prokaryotic type
IM45_1342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIN47533
LinkDB
All DBs
Position
complement(709946..710665)
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AA seq
239 aa
AA seq
DB search
MINGQNMNWLHMISEEKKQLYFKNILAFIASERAAGVTIYPAQNDIFKAFCLTELNTIKV
LILGQDPYHGPKQAHGLSFSVPPGVPIPPSLINIYKELKNDIPGFIIPPHGYLHSWATQG
IMLLNTVLTVEAGKAHSHAHLGWEIFTNKVITLVNSLGEGIIFLLWGNHAHTKSKIIDVR
RHYILKASHPSPLSAHRGFIGCHHFSKVNTLLKEQGKTTINWEPKLPIGWHHVNHINKI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgattaatggacaaaatatgaattggctgcatatgatttcggaggaaaaaaaacagctt
tattttaagaacatattagcttttatagctagcgaacgggcagcaggcgttactatttat
ccagcgcagaacgatatatttaaagctttttgcctgacggaacttaatactattaaggtt
cttatcctcggtcaagatccctatcatgggcctaagcaagcccatggtttatcattttct
gtaccgcctggtgtacctataccaccatcactgataaacatctataaagagctaaagaac
gatatacctggctttattataccaccacatggttatttacatagttgggcaacacaggga
ataatgctactcaatacagtattaaccgtagaagcaggcaaagcacattcccacgcccac
ttaggttgggaaatttttaccaataaagtgattactttagttaatagcctaggtgaaggc
attatctttcttctatggggtaatcatgcgcacacaaaaagcaaaataatagacgtgaga
cgccactacattctaaaagcatcacacccatctccgctgtccgcgcatcgcggctttatt
ggttgccatcatttctcaaaggttaatactctgctaaaagaacaaggtaaaactaccata
aactgggagccaaaactacccatagggtggcatcacgtgaaccacataaacaaaatatag
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