Candidatus Palibaumannia cicadellinicola BGSS: IM45_1375
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Entry
IM45_1375 CDS
T03277
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM45_1375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcib03019
]
IM45_1375
03016 Transfer RNA biogenesis [BR:
bcib03016
]
IM45_1375
Enzymes [BR:
bcib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IM45_1375
Messenger RNA biogenesis [BR:
bcib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IM45_1375
Transfer RNA biogenesis [BR:
bcib03016
]
Prokaryotic type
tRNA degradation factors
IM45_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_SLS1_2
S1_2
KH_2
aRib
Motif
Other DBs
NCBI-ProteinID:
AIN47549
UniProt:
A0A088MZA0
LinkDB
All DBs
Position
complement(727931..730051)
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AA seq
706 aa
AA seq
DB search
MLNPIVHHFQYGKHTLMLETGILARQATAAVMVSMDDTAVLVTVVGVKQTKPEQKFFPLA
VNYQERTYAAGRFPGGFFRREGRPSEGEILISRLIDRPIRPLFPEEFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPFGAARVGYINNQYILNPTMTELVESRLDLVVA
STANAVLMVESEAQLLSEEQMLGAVVFGHEQQQIVIRNIQNIVAEAGKPKWHWQAPKVNA
HLQSQVTKLAESSLNNVFCLREKQERYAYIESLKADIVSTLNQSNETIEEEEIKNILSNL
EKKIVRNRILRGEPRIDGRTKDMIRSLDMRTGILPRTHGSALFIRGETQALVTVTLGTER
DAQNIDELTGERTDRFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGMLAVIPKAKE
FPYTIRVVSEITESNGSSSMASICGASLALMDAGVPIKAAVAGVAMGLVKEGDNFVVLSD
ILSDEDYLGDMDLKVAGSREGITALQMDIKIEGITSNIIQLALNQAKDARMHILSMMEQV
ISAPCSDLSKFAPRIHTIKINPDKIKDVIGKCGSVIRALTEETKTIIEIEDDGTVKIAAT
DSTKARQAICRIEEITAEIEVGRIYHGKVTRIVDFGAFIAISGGKEGLVHISQISNKRVD
KIADYLVLDQVVLVKVLEVDRNGRVRLSMKEASITNDHNQDAMVLR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatcctattgttcaccattttcaatacggtaagcatactctaatgctagaaact
ggtattctagctcgtcaggcaactgcagcagttatggtaagcatggacgatacagcagta
ctagttaccgtagtaggcgttaaacaaacaaaaccagaacaaaaattctttccgctggcg
gtaaactaccaggaaagaacttatgcagctggccgttttcctggtggattcttccgccgt
gaaggccgtcctagcgaaggagaaatcttgatttctcgtcttatcgatcgtccgatccgt
cctttgtttccggaagaattcttaaatgaagttcaagtgatagccacagttgtatctgtt
aacccacaggtgagcccagatatcgtcgcaatgattggtgcttcagcagcgttaagtcta
tctggtatcccatttaacggaccgtttggcgcagcgcgcgtgggttacatcaataatcaa
tatatactgaacccaacgatgacagaattagtagaaagccgccttgatttagtagttgct
agtacggctaacgcggtactaatggttgaatcagaagcacaattgttaagcgaagagcaa
atgctaggcgcagtagttttcggccatgaacaacagcaaattgttatccgaaatattcaa
aatatagttgctgaagctggtaaaccaaaatggcattggcaagcaccaaaagtcaatgct
catctacagtcgcaggttactaaacttgctgaatccagcttaaataacgtgttttgcctt
agagaaaaacaagaacgttacgcctatatagaatctctcaaggccgatatagtaagcaca
ttgaatcagtcaaacgaaactatcgaagaagaagaaataaaaaatatcctcagcaacctg
gagaaaaaaatagtccgtaaccgtatcctacgtggtgagccacgcattgacggtcgtacc
aaagatatgattagaagtttagacatgcgtactggcatactaccacgtacccatggttcc
gcattattcatacgcggcgaaactcaggccttggtgaccgtcactcttggaactgaacgc
gacgcacagaatatcgatgagcttactggtgaacgtactgaccgtttcttactacactat
aattttcctccatattgcgtcggtgaaaccgggatggttggttcaccaaaacgtcgtgag
atcggtcacggtcgtttagcaaaacgtggtatgctagcagtcataccgaaagcaaaggaa
tttccttataccatacgcgttgtttcagaaataaccgaatccaatggatcctcttctatg
gcttcgatatgtggtgcctcactagcattaatggatgccggagtgcctattaaagctgca
gttgccggtgtggctatgggtttagtaaaggaaggtgataactttgtcgtgttatcggat
attctaagtgatgaagattatcttggtgatatggatttgaaagtcgctggtagcagagag
ggaattaccgcattacagatggacataaaaatagaaggtataaccagcaatattatacaa
ttagcgttaaatcaggcaaaagatgcgcggatgcatattttgagtatgatggagcaggtg
atcagcgcgccttgtagtgatctttccaaattcgcgccgcgtattcacaccatcaaaatt
aatccagataaaattaaggatgtgatcggaaaatgcggatctgtgatccgagctttgacc
gaagagactaaaacaatcatcgaaattgaagatgatggtaccgtgaaaattgccgcaact
gatagtactaaagcacgtcaagccatttgccgtatcgaagagattaccgcagaaatagaa
gtaggtcgtatctatcatggtaaagttacccgtatcgttgactttggcgcttttatagct
attagtggtggtaaagaggggttggtgcatatttcccaaatatctaacaagcgggtggat
aaaattgccgattatttagtcttagatcaggtagtgttagttaaggtactggaagtagac
cgtaatggacgcgttcgtctcagcatgaaagaagctagtattactaatgatcataatcag
gatgcgatggtactcagataa
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