Candidatus Palibaumannia cicadellinicola BGSS: IM45_143
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Entry
IM45_143 CDS
T03277
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcib03021
]
IM45_143
Transcription machinery [BR:
bcib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM45_143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
UCR_14kD
HTH_10
LysM
IF2_N
2Fe-2S_thioredx
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AIN46957
UniProt:
A0A088MXE1
LinkDB
All DBs
Position
77117..77977
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AA seq
286 aa
AA seq
DB search
MIKKKPVLAVMTKGSLEYYVKAANTYPMLTAEEELQFAEKLHYQGDIEAAKQLILSHLRF
VVNIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRRLFFNLRKIKQRLGWFNKDEVEMVAKALGVTSKDVREMESRMAAQDM
TFDPMLDDEGQDGLFIAPMLYLQDKYSDFADSIEEQNWDDHAADKLQIALEKLDERSQYI
IRTRWLDNNNKSTLQDLAKKYGVSAERIRQLEKNAMKKIRMAIEAQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaagaagccagttttggctgtaatgactaaaggtagtctagaatactatgtt
aaggctgccaatacttacccaatgcttacagcagaggaagaacttcagttcgctgaaaaa
ctgcattatcaaggtgatatagaagctgcaaagcaactaattttatctcatctacgcttt
gtagttaatattgctcgtaactattctggttatggtttacctcaagctgacttaatccag
gaaggtaatataggtctgatgaaagcggtacgtcggttcaatccagaagttggtgtacgc
ctagtatcctttgctgtgcactggattaaagcagaaattcacgaatatgtactacgtaac
tggcgcattgttaaggtagctactaccaaggcacaacgtaggttattttttaatttacga
aaaatcaagcaacgtttgggctggtttaataaggacgaggtagaaatggttgctaaagcg
ctaggagtaaccagcaaagatgtccgtgaaatggagtcccgcatggccgcgcaggacatg
acattcgatcctatgctagatgatgagggacaagatgggctgtttattgcgccaatgctc
tatctacaggataaatactctgattttgccgatagcatcgaagaacaaaactgggatgat
catgcagcagacaaacttcaaatagctttggaaaaactagatgaacgcagtcagtacata
atacgtactcgctggctggataataataacaagagtaccctacaagatctagcaaagaaa
tatggtgtatccgcagagcgcattcgtcaattagaaaagaacgcaatgaagaaaatacgc
atggcgattgaagcacaatga
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