Candidatus Palibaumannia cicadellinicola BGSS: IM45_680
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Entry
IM45_680 CDS
T03277
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcib03016
]
IM45_680
Enzymes [BR:
bcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IM45_680
Transfer RNA biogenesis [BR:
bcib03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IM45_680
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AIN47214
UniProt:
A0A088MYC8
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Position
361146..363086
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AA seq
646 aa
AA seq
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MFQNNSLLIQLKQQLHSKTPRTEGVVKSTDKGFGFLEVDSQNSYFIPPPFMKKVMHGDKI
SAVLHTEKDRKIAEPEALIEPFLSRFVGQIQIKDDRVTILPENRLIKELIPAGPRHNVSN
RLSTGDWVVAEMCRHPLEGHRYFYAQIIELVTTSGNYFAPWWVTLAKHNLEREAPAMPKG
LIPQDDGLIREDLTALNFITIDNASTEDIDDALHVAYGPNETLVITIAIADPTAWIIAGS
KLDTIARHRAFTNYLPGFNIPMLPRMLSDNLCSLRAYEKRPALVCQVTMQYDGTLEEDIR
FFTAWVESKAKLSYDDVSDWLENSGVWQPDNNTIAEQIRLLHRVCQARSSWREQHALVFK
DKPDYRFILDEKGKVNNIIAEPRRIAKRMIEEAMIAANICAARVLRDGLGFGLYNTHNGF
DVAMVDQAVAILRNHNIPADANKLLTMKGFCALRRQLNAMPTSYLDSRIRRFQTFAELKT
EPGPHFGLGLDVYATWTSPIRKYSDMMNHRLLKALIGARKAERPKKEITLRISERRRQNR
IAERDVEDWLYARFLQKTAGTEICYSAEIIDICRSGMRVRLVDNGAIAFIPALFIHSIRD
ELVCNQDTGIVQVKGKECYRQGDTIEVTIVEVRMENRSIIAKIISA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataactctctactgatacagctgaaacaacaactgcactctaaaacacca
cgcacggaaggtgtagtaaaaagtactgataaagggtttggcttcctcgaagttgactcg
caaaatagctatttcattcctcccccttttatgaaaaaagtaatgcatggtgataaaatt
agtgcggtattacatacagaaaaagatcgtaaaatcgctgaaccagaggctttaattgag
cctttcttatctcgctttgtaggtcagatacaaatcaaagacgatagagtaactatttta
ccagagaatcggctgattaaagaattgataccggcaggtccgcgacacaacgtgagtaat
agactctctactggagattgggtagtagcggaaatgtgccgccatcctctagaaggtcat
cgctacttttacgctcaaataatagaactagtgacgaccagcggtaattattttgctcca
tggtgggtaaccttagctaagcataatttagaacgagaagcgccagctatgcctaaaggt
ctaataccacaagacgatggtctgatacgagaagatctaacagcgctaaattttatcaca
attgataatgctagtactgaagatatagatgatgcattacatgtagcttacggaccaaat
gaaacattagtcattacgattgctatagcagatccgacggcatggattattgctggaagt
aagttagatactattgctcgtcatagagccttcaccaactatcttcctggctttaacatt
ccaatgttaccgcggatgttatcagataatctatgttctttacgcgcttatgaaaagcga
ccagctcttgtctgccaagtgacaatgcaatatgatggtactctggaagaagatatacgt
tttttcacagcctgggtcgaatctaaagctaagttaagctatgatgatgtatccgactgg
ctagaaaacagcggtgtgtggcaacctgataacaatactatcgctgagcagatacgcctt
ttacatagagtttgccaagctcgtagctcctggcgcgagcaacatgcgttagtatttaag
gataaaccagattatcgttttattctggatgaaaaagggaaagtcaataatattattgcc
gaaccgcgccgtattgcgaaacgaatgattgaagaggcaatgatagcggctaatatctgc
gcggcacgtgtattacgtgatggtctgggctttggtctatataacacccataatggcttt
gacgtagctatggtagatcaggcagtagctattttaagaaaccataatattccagccgat
gctaataaattgctgacgatgaaaggattctgcgctttacgtcgtcagttaaatgccatg
ccaacctcatatctggatagccgcattcgtcgtttccagacgtttgcagagttaaaaaca
gagcctggtccccactttggtctcggactagatgtttatgcaacttggacttcccctatt
cgtaaatatagcgatatgatgaaccatcgtttactaaaggcgcttattggtgcaaggaaa
gcagagcgacctaaaaaagagattactttgcgtatatctgaacgtcgtaggcaaaaccgt
attgcggaacgagacgtagaggattggctatatgctcgctttcttcaaaaaaccgcaggt
accgagatttgttatagtgctgaaattatcgatatttgtcgtagtggtatgcgggtacga
ttagtagataatggtgctattgctttcatccctgccctctttatccatagtatacgtgat
gagttagtttgtaaccaggataccggcatagtacaagtaaaaggtaaagaatgttaccgc
cagggagatacaatagaggtaactattgtagaagtacgtatggaaaatcgttctattatt
gctaaaattatttcagcataa
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