Candidatus Palibaumannia cicadellinicola BGSS: IM45_880
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Entry
IM45_880 CDS
T03277
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bcib
Candidatus Palibaumannia cicadellinicola BGSS
Pathway
bcib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM45_880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcib03400
]
IM45_880
Enzymes [BR:
bcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
IM45_880
DNA repair and recombination proteins [BR:
bcib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IM45_880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIN47311
UniProt:
A0A088N1Z9
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All DBs
Position
complement(453405..454280)
Genome browser
AA seq
291 aa
AA seq
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MSDKKFIGAHVSATGGLNKAIIRAHALQATAFAMFTKNPRQWKAAALTQNTIESFRATCA
EYHYTKEQILPHNSYLINLSHPIKDEFEKSLAAFIDEMHRCEQLGLSLLNFHPGCHLQQI
NEYTSLTRIAESINVALEKTTSITAVIENTAGQGSHMGFSFEQLAEIIRQIDDKNRIGVC
IDTCHAFAAGYDLRTEQSCVATFNDFADTIGFKYLRGLHLNDAQRSCGSRVDRHQSLGEG
KIGYTAFAWIMADKRFDGIPIILETINPALWSQEIAWLKTMAASLDTTTTK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaaagtttattggtgcacatgttagtgccacaggcggtctgaataaagct
atcatacgcgcacatgcattacaggcgactgcattcgctatgtttaccaaaaatccacgt
caatggaaagcagcggcactgactcaaaatacgatcgaaagtttccgcgccacctgcgca
gagtatcattatactaaagagcaaattttaccccacaatagctacttgattaacctcagc
catccgatcaaagatgagtttgaaaagtcgcttgctgcttttattgacgaaatgcaccgc
tgtgaacaattaggccttagtctactgaacttccatcctggttgccatttgcagcaaatc
aatgaatacacgagcctaactcgcattgcagagtctatcaatgttgcactagagaaaact
acaagcatcactgcagtaattgaaaataccgctggccaaggtagtcatatgggatttagc
tttgaacagttggcagaaatcattcggcaaatagatgataaaaaccgcatcggtgtctgt
attgatacctgtcacgcattcgcagccggctatgatttacgtaccgaacagagttgcgtt
gcaaccttcaatgactttgctgacaccattggctttaaatatctgcgtggtctgcattta
aacgatgctcaaagatcttgcggtagtagagttgatcgacaccaaagtttaggtgaaggc
aagataggctatacagcatttgcttggattatggctgataaacgttttgatggtattccc
attattttagaaactattaatcctgctctttggtcgcaggaaattgcttggctaaaaact
atggcggccagcttagataccacgactacgaagtaa
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