Candidatus Palibaumannia cicadellinicola B-GSS: AB162_105
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Entry
AB162_105 CDS
T04544
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcig
Candidatus Palibaumannia cicadellinicola B-GSS
Pathway
bcig03420
Nucleotide excision repair
bcig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB162_105 (uvrD)
03430 Mismatch repair
AB162_105 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcig03400
]
AB162_105 (uvrD)
Enzymes [BR:
bcig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB162_105 (uvrD)
DNA repair and recombination proteins [BR:
bcig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB162_105 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB162_105 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_11
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKZ65724
UniProt:
A0A0K2BKK9
LinkDB
All DBs
Position
119314..121254
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AA seq
646 aa
AA seq
DB search
MHISGLLNSLNNQQRKAVSAPIGNIMVIAGAGSGKTRVIAHRIAWLISVKNCLPSSILAV
TFTNKSAEEMRSRIENIIGDHSSGMWIGTFHSLAYRILRINYINAHLPKNFQVIDSEDQL
KLVKNIIRYLNLDETTWQPCQAMWYINKNKDEGRRPNNINNYYNKFEETWFSIYKIYQEI
CNNTGLVDFAELILRVYEMLINNSNIMQYYRNKFTTILVDEFQDTNNIQYYWIRMLAGNK
GNVTIVGDDDQSIYRWRGAQVENIQRFINDFPKVKIICLEQNYRSTSNILYAANQLIANN
IGSRITKNLWTNNAVGEQITIYCALNELDEAKFVINCIKINKKNGGLLQECAILYRNNAQ
SRVIEESLINMKIPYHIYGGMRFFERQEVKNVLAYLQLISNKNNDAAYERIINIPIRGIG
LRTIEKLRNIACNRQLTLWQASLVLINERMISNKLSLAMQNFITLINELERDTANLPLHM
QTQLVIQKSGLLAMYQKEIGDKDQARIKNIEELITAAKQFYYEDKDMLPLQAFLSHVALE
ETIDKQMFPKDAVQLMTIHSAKGLEFKQVFIVGMEEGIFPSQQALNEQKNIEEERRLAYV
GVTRAMKKLTITYAKKRYLYGQEAYRRRSRFISELPKQCLEQLNYK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttctggtctattgaatagtttaaataatcaacaaagaaaagctgtctcagca
ccaataggtaatattatggtaatagctggtgccggtagtggtaaaactagagtgattgca
catcgtattgcatggttaatttcagtaaaaaattgtttgccatcttctattttagcagta
acttttactaataaatcagcagaggagatgcgtagtagaatagaaaatataataggtgat
cattcttctggaatgtggataggaacgtttcatagcttagcataccgtattctacggata
aactatattaatgctcatttacctaaaaattttcaagttatcgatagcgaagatcaacta
aaattagtaaaaaatattattcgttaccttaatttagatgagacaacatggcaaccatgt
caagctatgtggtatataaacaaaaacaaagatgaaggtaggcgtccaaacaatattaat
aattattataacaagtttgaagaaacttggtttagtatttacaaaatttaccaggagata
tgtaataatactggactagtagattttgctgaattaatactaagagtttatgagatgcta
ataaataatagtaatataatgcaatattatcgtaataaatttactacgattttagtagat
gaatttcaagacacaaataatattcagtactactggattagaatgttagcaggtaataaa
ggtaatgtcacaattgttggtgatgatgatcagtccatttatcgttggaggggggcgcaa
gtagaaaatatacagcgttttattaatgattttcctaaagtaaaaattatctgcttggaa
caaaactaccgctctactagtaatattttatatgcagctaatcaattaatcgctaataat
attggtagtagaattactaaaaatctttggacaaacaatgcagtaggagaacaaattact
atatactgcgctcttaatgaactagacgaggcaaaatttgtcattaattgcattaaaatt
aacaaaaaaaatggtggtttactccaagagtgcgcaattctatatcgtaataatgcacaa
tcaagagtgatagaagaatcactaatcaatatgaaaatcccttaccatatatatggtggt
atgcgttttttcgaacgtcaagaagttaaaaatgtactagcttatttgcagttaatttct
aataaaaataatgatgctgcttatgaacgtataattaatatacctattcgtggcataggt
ctaagaactatagaaaaattacgtaatatagcctgtaatagacaactcacattatggcag
gctagtttagtgttaataaatgagagaatgatctctaataaattatctttagctatgcaa
aattttattactctaataaatgaattagagagagatacagccaatttaccattacatatg
cagactcaattagtaatacaaaaatctggcttattggctatgtatcaaaaagaaataggc
gataaagatcaggctcgtattaaaaatattgaagaacttattacggcagctaagcaattt
tactacgaagacaaagatatgctaccgttacaagcttttttgtcccatgttgctctagaa
gagactatagataaacaaatgtttcctaaagatgctgtacaactaatgacaatacattct
gctaaaggtttagaatttaagcaagtatttatcgttgggatggaagagggaatttttcct
agccaacaagctcttaatgaacagaaaaatatcgaagaagagcgacgtttagcttatgta
ggagttactagagcaatgaaaaaactaactattacttatgctaaaaaacgttatctatat
ggtcaggaagcttatcgtcgtcgctcacgttttatcagtgaattacctaaacaatgctta
gaacaattaaattataaataa
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