Candidatus Palibaumannia cicadellinicola B-GSS: AB162_228
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Entry
AB162_228 CDS
T04544
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bcig
Candidatus Palibaumannia cicadellinicola B-GSS
Pathway
bcig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AB162_228 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcig03019
]
AB162_228 (rnc)
03009 Ribosome biogenesis [BR:
bcig03009
]
AB162_228 (rnc)
03036 Chromosome and associated proteins [BR:
bcig03036
]
AB162_228 (rnc)
Enzymes [BR:
bcig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AB162_228 (rnc)
Messenger RNA biogenesis [BR:
bcig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB162_228 (rnc)
Ribosome biogenesis [BR:
bcig03009
]
Eukaryotic type
90S particles
RNase
AB162_228 (rnc)
Prokaryotic type
rRNA processing factors
AB162_228 (rnc)
Chromosome and associated proteins [BR:
bcig03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AB162_228 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKZ65830
UniProt:
A0A0K2BKH8
LinkDB
All DBs
Position
complement(249109..249774)
Genome browser
AA seq
221 aa
AA seq
DB search
MGYFFKRHELLLQALTHRSASNIHNERLEFLGDSILSYVIAYDLYNRFQDINEGDMSRMR
ATLVRENTLAEIARELELSTCLRLGLGELKSGGLRRESILADALEAVIGSVFIDSDILTV
DKLILNWYSSRLNEISPGEKQKDPKTRLQEYLQGRHMPLPVYIVVQIYGDTHDQKFIIHC
QVSGIAYPIVGNGSSRRQAEQSAAKQALKILNQDTIINNER
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggctatttttttaaacggcacgagttattattacaagccttaacacatcgtagtgcg
agtaacatacataatgagcgactagaatttcttggcgactctatactaagttatgttata
gcatatgatctatataatcgttttcaagatattaatgagggagatatgagtcgtatgcgt
gctaccttagtaagggaaaacacattagcagaaatagctagagagttagaattaagtacg
tgtttacgtctaggtcttggagaactaaagagcggtggattacgccgtgaatccattctt
gccgatgcattagaagctgtaattggtagtgtatttattgacagcgatatccttactgta
gataaactaatacttaactggtattccagtcgcttaaatgaaattagtccaggtgaaaaa
caaaaagatccaaaaactagattgcaggagtatctacaaggacgccatatgccattacca
gtatatatagttgttcaaatttatggtgatactcatgatcaaaaatttattattcattgt
caggttagtggtatagcatatcctattgtaggtaatggttctagccgtcgtcaagcagaa
cagtcagctgcgaaacaagctcttaaaatattaaatcaagacactatcataaataatgaa
agataa
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