Candidatus Palibaumannia cicadellinicola B-GSS: AB162_248
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Entry
AB162_248 CDS
T04544
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcig
Candidatus Palibaumannia cicadellinicola B-GSS
Brite
KEGG Orthology (KO) [BR:
bcig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcig03032
]
AB162_248 (topA)
03400 DNA repair and recombination proteins [BR:
bcig03400
]
AB162_248 (topA)
Enzymes [BR:
bcig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB162_248 (topA)
DNA replication proteins [BR:
bcig03032
]
Prokaryotic type
DNA Topoisomerases
AB162_248 (topA)
DNA repair and recombination proteins [BR:
bcig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB162_248 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Toprim
Zn_ribbon_bTOP1
Zn_ribbon_Top1
CK_II_beta
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AKZ65849
UniProt:
A0A0K2BKX0
LinkDB
All DBs
Position
complement(270719..273304)
Genome browser
AA seq
861 aa
AA seq
DB search
MSKALVIVESPSKAKTINKYLGNEYIVKSSIGHIRDLPVSVSNSKKKFKTNQSVQLHKYA
ALVKSMGIDPYDNWVANYEILPGKEKIVNELKTIAETVEHIYLATDLDREGEAIAWHIRE
VIGGDDNRFHRIVFNEITRNAITQAFKKPVELNISRVNAQQARRFMDRIVGYMVSPLLWK
RIARGLSAGRVQSVAVRLIVEREREIKIFLPEEYWELSANMHTINGLPLTMRVINQDNKP
FRPINYHQIQAAVNLLKRASYFISDKKNKITNSKSTAPFITSTLQKAASTRLGYSIKNTM
ILAQRLYETGYITYIRTDSTNISKDALNIVRSYIKDIFGCQYLPNKPNEYINQCNTQEAH
EAIRPSDINLHASQIKNLEEEAQKLYQLIWMQFVASQMMPAQYESTSIIVAAGNFKLCAR
SRKLIFDGYTKVLPPIVNQQEHNILPILEIGQILNLKKLIPSQNFTNPPSRYSEASLVNE
LEKRRIGRPSTYMSIISSIQERGYVNIDNNRLYAEKIGEIVTDRMEEHFKELMNYDFTAN
MEDKLDQIANNKQDWKNVLDNFFSKFIKQLQNAEKDPAEGGMIPNNTVITNILCPICSRP
MVIRTASTGVFLGCSGYELPKKYRCKKTINLRPESINRFEGNNIKTNIFSMRQSCLKCNH
IMDSYLIDNNRKLHVCGNNPLCDSYNIEQGKFNFYVNDHAIKCEICCSDMLLKLGKFGKY
VACINDKCKNTRKILRNGEIAPEKIACVPLPELACKTYDDYFVLRNGASGLFLAAKNFPK
VRETRAPLIEELVQFKDRLPKILRYLADAPSQDEEGNKTLLRFSRKTKKQYISSEKNGKA
TGWKAFFIDGHWQVTKNISVI
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgcttgttattgtggaatctccatcaaaagcaaaaacaattaataaatat
ttaggtaatgaatatatagtaaagtctagtattggtcatattcgagatttaccagtgagt
gtttctaacagtaaaaaaaaatttaaaacaaatcaatcagtacaattacacaagtacgcg
gctttggtaaaaagtatgggtattgatccatatgataattgggtagctaattatgaaatt
ttgcctggaaaagaaaaaatagtaaatgaattaaaaactatagctgaaacagttgaacat
atttatctagctactgatcttgatcgtgaaggtgaagcgattgcctggcatattagggaa
gtaataggcggtgatgataatagattccaccgtatagtatttaacgaaattactcgtaat
gctattacacaagcttttaaaaaaccagtagagcttaatatatctcgtgtcaacgcacag
caagcaaggcgctttatggatcgcatagttggttatatggtttctcctttattatggaaa
aggatagctaggggtttgtctgcaggtcgtgtacaatctgttgctgttagacttatagta
gaacgtgaaagagaaattaaaatatttttgcctgaagaatattgggaactgtctgctaat
atgcatactattaatggtttaccattaactatgcgagtaataaaccaagataataaacca
tttagaccgattaattatcaccaaatccaagctgcagttaatttactgaaaagagctagt
tattttatatctgataaaaaaaataaaattactaatagtaaatctaccgcaccttttatt
acatcaactctacaaaaagctgctagtactcgtttaggctatagtattaaaaacactatg
atattagctcaaagactatatgaaactggatatattacttatatacgtacagactcaact
aatattagcaaagatgcactaaatatagtacgtagctatattaaagatatttttggctgt
caatatctgcctaataaaccaaatgagtacatcaatcaatgtaatacgcaagaagcacat
gaagctattaggccatcagatattaatcttcacgcttctcaaataaaaaatctagaagaa
gaagcacagaaactgtatcaattaatatggatgcaatttgttgctagccagatgatgcca
gcgcagtatgaatccactagtataatcgtagcagctggtaattttaaactatgtgcgcgc
agtagaaagctaattttcgatggttatacaaaagtactaccaccaattgtaaatcagcaa
gaacataatattttgccaatactagaaattggccagatactaaatttaaaaaaattgatt
cctagccagaattttactaatcctccttcacgttacagtgaagcttcactagttaatgaa
ttagaaaaacgtcgtattgggcgaccttctacatacatgtccattatttcttctattcaa
gaacgtggttatgtaaatatagacaacaatcgtttatacgcagaaaaaattggcgaaata
gtcactgataggatggaagaacattttaaagaactaatgaattatgactttacagctaat
atggaggataaattagatcaaattgcaaacaataagcaagattggaagaatgttcttgat
aatttttttagtaaatttattaaacaactacaaaatgctgagaaagatccagcagaaggt
ggtatgatacctaataatacagtaataactaatatattatgccctatttgtagcaggcca
atggtcattcgcacagctagtactggagtctttctaggttgctctggttacgaacttccc
aaaaaatatcgttgcaaaaaaacaataaacttaagacctgaatccattaatagattcgaa
ggtaataatataaagactaatattttttctatgagacaaagttgtttaaaatgtaatcac
ataatggatagctatttaatagataataatcgtaaattacatgtatgcggtaacaatcct
ttatgcgatagttataatatcgagcaaggaaaatttaatttttacgtcaatgatcatgca
ataaaatgcgaaatatgctgttctgatatgctcctaaaactaggaaaattcggtaaatat
gtagcttgtataaatgataaatgcaaaaatactagaaaaatattacgtaatggtgaaata
gcaccagagaaaattgcttgcgtacctctaccagagctagcttgtaaaacttatgatgat
tattttgtgttacgtaacggtgcttctggactatttttagcagctaaaaattttccaaaa
gtacgtgaaactcgtgcaccactaattgaagaactagtgcaattcaaagaccgcctacca
aaaatactacgttacctagcagatgcaccatcgcaagatgaagaagggaataagacttta
ttacgttttagtcgtaaaactaaaaaacaatatatatcatcagaaaaaaatggtaaagct
acaggctggaaagcattttttatcgatggtcattggcaagtaacaaaaaatatatcagtt
atataa
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