Candidatus Palibaumannia cicadellinicola B-GSS: AB162_495
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Entry
AB162_495 CDS
T04544
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcig
Candidatus Palibaumannia cicadellinicola B-GSS
Pathway
bcig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB162_495 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcig03400
]
AB162_495 (recD)
Enzymes [BR:
bcig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB162_495 (recD)
DNA repair and recombination proteins [BR:
bcig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB162_495 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Viral_helicase1
AAA_11
SLFN-g3_helicase
NAT10_TcmA_helicase
UvrD_C_2
SH3_13
UvrD-helicase
AAA_22
nSTAND3
DEAD
AAA_24
YxiF
FtsK_SpoIIIE
TrwB_AAD_bind
Bcl-2
Motif
Other DBs
NCBI-ProteinID:
AKZ66078
UniProt:
A0A0K2BM12
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All DBs
Position
521381..523294
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AA seq
637 aa
AA seq
DB search
MEEIIIQAQKLNLWRPLDIYFARMIAAASSPDYYSQALLLLASACLSADIGVGHVCLPLS
RLTKNYLFEGRYPKLSMQIFQKIGHPNMETWHNVLLKSPSVSDGLYSTPLVLDNNMLYLH
RLWQYECTIANFFNRPLMIINNQINYKLVSTVLDSIFSKNNHNHIMNWQKIAIAIAITSK
VALISGGPGTGKTNTLAKLLVALLLINTDSTNYSARLRIIITTPNSQMISRLREYIMLSM
NNLILDNSLRNKIVYQIMSIPRLLGVLPNSKRMRYNCDNKLNVDILIIDDASMIDLQMMA
NIINAIPNQTKVIFFGDYYQLASVETGAVFRDICKFADTSGYSEIRSQYLVSLTSCRKIF
YRSENNYRQNKIADIFCCLRTNYRFKDSSGISHLANAIKAGNIKDTIALLNSIKYPEINY
IPRSNKNDYKNMVDDFVTGYQYYLKLVHQGKSHHKILEYFNKYRILAVLREGQFGVNNLN
SSIEHALICYGLIKKTISFSCYVGQPIIIMRNSPLLELYNGDIGIVLLDSKHTRLLAYFP
LYDGTIKTVPINCLPKYETAFTITVHQSIGSEFTNTALVLPDNILPVLTRELLYTGVTRA
CKNLSIYAPHNKEVLVHTINSTINRRSGLKEKLLIIE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattataatccaggcacagaaactaaatttatggcgcccgttagatatttat
tttgctcgtatgatagcagcagcgtcatcgcctgattattattcacaggcattattacta
cttgctagtgcttgtcttagtgcggatataggagtaggccatgtgtgtctaccattatca
agattgaccaaaaattacctattcgaaggtcgctacccaaaactatctatgcaaattttt
caaaaaattggtcacccaaatatggaaacttggcataatgtgctactaaaatcaccatca
gtaagcgatggtttatactcaacgcctttagtactagataacaacatgctttatttacat
cgtctgtggcaatatgaatgtactattgctaatttttttaacagaccgcttatgattatt
aataatcagataaattataaactagttagcactgtattagacagtattttttcgaaaaat
aaccataatcatattatgaactggcagaaaattgctattgctatagcaatcacttctaag
gtcgcactaatatcaggtggtcctggtacaggaaaaactaacactttagctaaattacta
gtagctttattacttattaatactgattcgactaattatagtgcgcgtttgcgtattatt
atcactaccccaaatagtcaaatgatttcacgcttaagggagtatattatgctctctatg
aataatctgatattagataatagtttaagaaacaagatagtatatcagattatgagtata
cctagattgttaggtgtactacctaacagcaaacgcatgcgttataattgtgataataaa
cttaatgtagatatattaattattgatgacgcatcaatgattgatttacagatgatggct
aatattataaatgctattcctaatcaaactaaggtaattttttttggtgattattatcag
ttagcatctgtagaaacaggagcagtattcagggatatttgtaaatttgcagatactagt
ggttacagcgaaatacgctctcaatatttagtaagtttaactagttgtagaaaaatattc
tatagatcagaaaataattataggcagaacaaaatagcagacatattctgttgtttaaga
acaaattacagatttaaagatagttctggcattagccatttagctaatgctattaaagct
gggaatataaaagatactattgctttgcttaattctataaaatatccagaaattaattat
ataccaagatcaaataaaaatgattacaaaaatatggtagatgattttgttactggctac
caatactatctaaaattagtacatcaaggtaaatcacatcacaaaatactagaatatttt
aataaataccggatacttgctgtactaagagaaggtcaatttggcgtaaataacttaaat
agcagtattgagcatgctttaatttgctacggtcttattaagaaaacaattagctttagt
tgttatgttggtcaaccaataataattatgcgtaactcgccgttattagaattatataat
ggggatattggtatcgtgcttttagatagtaagcatacaagactacttgcatattttcca
ttatatgatggaaccattaaaacagtacctataaactgtctaccaaagtatgaaacagct
ttcacaatcacagtacatcaatcaataggatcagaatttactaatactgcgttagtacta
ccagataatattttgccagtattgacccgtgaacttttatatactggagttactagagca
tgcaaaaatttgtctatttatgcacctcataataaggaggtattagttcatacgattaat
agtactattaatcgtcgtagcggacttaaagaaaagttactaataattgagtaa
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