Niallia circulans: C2I06_00225
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Entry
C2I06_00225 CDS
T06357
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bcir
Niallia circulans
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_00225 (addB)
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2I06_00225 (addB)
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C2I06_00225 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYV65423
UniProt:
A0A268FDE2
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All DBs
Position
46292..49783
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AA seq
1163 aa
AA seq
DB search
MTVRLLTGRSGTGKTTFCIEEIQAKLAENPEGNPIIYIVPDQMTFMSDQRLLSGSNVQGM
FRSQVYSFTRLAWRVLQETGGISRYHINSMGVSMLIRKIIEENKNELTLFKKVADKNGFI
DQVEQLVTEFRRYTVTPEELLATKAQLAGTKESTKALQDKISDLELIYEKFEERIIGNYI
DGEDYFRLLAEKISESSYLQKAEIYIDGFYSFTPQEYLIIQQLMHTCEKVTITNTLDPFS
SQNDDLSLFRMTTESFQTIQAMAKQLGVEVEVVKLAKFKKSSHPSLVHIESHFDSRPARA
FTEDATIKFAESVNPRAEIEGIAREIVKLVRHKNYRYREISLLSRNLSAYQNIIETVFRD
YHIPFFIDQKSRMHDHPLVELIRSSLEIFDTNWRYEPVFRSIKTELLFPLHERKNKIREK
VDRLENYCLAYGIKGNKWTSKERWKYRRIKGLEFEQGVQTDAEKEFEQELNELRLSLTAP
LIRLQNRLKRGKTGRAKCEALYLFLEELEVPVKMEYWKNELESKGELVKAGEHDQAWNSI
VDLLDQFVEILGEEEFSTKQFATVISAGLDTLKFSLVPPALDQVLIADLEQSRLNDIKVA
FVIGLNEGVFPSRFQDEGILADTDRESLQQKGMKLAPTSKTRLLDEEFLAYKAFTTPTDY
LYLTYPLANDEGKSILPSTYIKRMQDLFPKAETVYYMSDPKELSEEGQLDYVVHLQTTLS
YLTGQLYLKKREYPIYDFWWDVYNEYIEHPNWREPAKKVFSSLTYQNKTEKLSEQTSSEL
YGDTISASVSRMELFHACPFSHFATHGLKLRERQVYRLEAPAIGDLFHAALKYIAETVMH
QELMWSSLTREQCESLARDAVEMLAPKLQNEILLSTNRHHYIKRKLEQIISRASLILSEH
AKHSGFSPIDLELEFGPKGKLPSISFPLKNGTNMNLIGRIDRVDKAEVGDEVYLRVIDYK
SSGQELNMNEVYYGLSLQMLTYLDLIITNSTILVDKKASPAGVLYFHVHNPMISSKKILT
LDEIEEELLKKFKMNGLMLGEERVIQLMDETLEKGNSPIVPAGFKTDGTLTKASKVATRD
DFSKMQKFVRHKYKDSGNKIISGEVGIEPYRLNDKKPCTFCSFKSVCQFDEALETNQYRQ
LPAYSKDEVLQLIREEANTSERD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcgcttattaacaggtcggtctggaaccgggaaaacaacgttctgtatagaa
gaaattcaagcgaaacttgctgaaaatccagaagggaatccgattatttatatcgttcca
gatcagatgacctttatgtcagatcaacgtttattgtctggctcgaatgttcagggaatg
tttcgttcgcaagtatatagttttacccgccttgcatggagagtactgcaagaaacaggc
ggaatcagccgctaccacattaatagtatgggtgtaagcatgctgattcgaaaaataata
gaagagaataaaaatgaactaactctatttaaaaaagttgccgataagaacggatttatt
gatcaggtagaacaattagtcacggagtttagacgatatactgttactccagaggaactg
ttagcaacgaaagcgcaattagcaggaacaaaagaatcaaccaaggctttacaggataaa
atcagtgaccttgaattaatctatgaaaagttcgaagaaagaattattgggaattacatt
gatggggaggattatttccgtttgcttgcggaaaagattagcgagtcctcttatttgcaa
aaagctgaaatttatattgatggtttttatagctttacacctcaagagtatttaatcatt
cagcagttaatgcatacatgtgaaaaggtcacgattacgaatacactcgatcctttttct
tcccaaaatgatgacttaagtttattccgaatgactacagaatccttccaaactattcaa
gcgatggctaagcaattaggagtagaagtcgaggttgtcaaactcgcaaaattcaaaaaa
agtagccatccatcgttagttcatatagaaagtcattttgatagcagaccagctagagct
tttactgaagatgcaactattaaatttgctgaaagcgtaaatccgcgtgcagaaatagaa
gggattgcacgggaaatcgtaaaactcgttagacataagaattaccgctatcgagagatt
agtttactgtctcgaaatttgtcagcctatcaaaatattatagaaactgtatttagagat
tatcatatccctttttttattgatcagaaaagtagaatgcatgatcatcctttggtggag
ctgatccgttcctctttagaaattttcgatacaaattggcgctatgagccggtgtttcgt
tcgataaaaacggagttactatttccacttcatgaacgtaaaaataagattagagaaaaa
gtagacaggcttgaaaactattgtcttgcatatggaataaagggaaataagtggacttca
aaagaacgctggaagtatcgaagaattaaggggctggaatttgaacaaggtgtacagacg
gatgcagaaaaggaattcgaacaagaattaaatgaactgcgtctctctttaactgctcct
ctaatccgtcttcaaaaccgtttgaaaagaggaaaaactggtagagcgaaatgtgaagca
ctatatttatttttagaagagcttgaagtgccggtgaagatggagtattggaagaatgag
ttagagagcaaaggggagctagtaaaagctggagagcatgatcaagcatggaacagtata
gtagatctattagatcaatttgtggagatactcggggaagaggaattttcaacaaagcaa
tttgcaacggtgattagtgcagggctagatacattaaagttttctcttgttcctccagca
ctggatcaagtattgattgctgacttagaacagtctcgtttaaatgatataaaggttgcg
tttgttatcggtctaaatgagggtgtttttccatcgagatttcaggatgagggaatactt
gcagacacagatagagaatcattacaacaaaaagggatgaagcttgctcctacaagcaaa
acaaggttattagacgaggagtttcttgcatacaaagcatttacaacgccaacggattat
ctttatttaacctatccactagcaaatgatgaaggaaagtctatcttgccatctacttat
atcaaaagaatgcaggatctatttccaaaagctgaaactgtctattatatgtctgatccg
aaagaattgtcagaagaaggccagcttgattatgtggttcatttacaaacaactttgtct
taccttactggccagctttatttgaagaaaagagagtatcctatctatgatttctggtgg
gatgtttacaatgagtatatcgaacacccaaattggagagaaccagccaaaaaggttttt
tctagtttaacttatcaaaataaaaccgagaaattatcggaacaaacaagcagtgaattg
tatggagatactatttcagcaagtgtttcgagaatggagttatttcatgcttgtccattt
tcgcattttgctacccatggattaaagctccgcgaacggcaagtatatcgtttagaagca
cctgctattggtgatttatttcatgcagccttaaaatatattgcggaaacagttatgcat
caagagttaatgtggtctagtttaacaagagagcaatgtgaaagtttagcaagagatgcg
gtagaaatgctcgcacctaaattgcagaatgagatattgcttagtactaatagacatcat
tatataaaaagaaagctagaacaaatcattagcagagcttctcttattttaagcgaacat
gccaaacatagcggtttctcgccaattgatttagaacttgaatttggaccaaaaggtaag
ctgccatcgatttcttttccgctgaaaaatggcacaaatatgaatctgattggtagaatt
gaccgtgttgataaggctgaagttggggatgaagtatatttacgtgtaattgactataaa
tcaagtggtcaagaattaaatatgaatgaagtttactatggcttgtccttacagatgctt
acttatttggacttaattattacaaacagcacaattttggtggataagaaagcgagcccg
gctggagtattatattttcatgttcataatccgatgatttcaagtaaaaaaatccttaca
ttagatgaaattgaagaagagctattaaagaagtttaaaatgaatgggttaatgctggga
gaagaacgagtcattcagttaatggatgaaacattggaaaaagggaattcgccaattgtc
ccggcaggttttaaaactgatggcacccttacgaaggcatcgaaggtagctacaagagac
gactttagcaaaatgcaaaaatttgtacgtcacaaatataaagattcaggaaataagatt
attagtggagaagtaggtatagaaccttatcgattaaatgacaagaagccttgtactttc
tgctcgtttaagtctgtctgtcaatttgatgaagcattagaaacaaatcaatatagacaa
ttgccagcctactcaaaagacgaggtactgcaattaattagagaggaggctaatacaagt
gaaagagattaa
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