Niallia circulans: C2I06_00790
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Entry
C2I06_00790 CDS
T06357
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcir
Niallia circulans
Pathway
bcir03420
Nucleotide excision repair
bcir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2I06_00790
03430 Mismatch repair
C2I06_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_00790
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2I06_00790
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2I06_00790
MMR (mismatch excision repair)
Other MMR factors
C2I06_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
DEAD
DUF678
ResIII
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AYV65525
LinkDB
All DBs
Position
complement(166891..169218)
Genome browser
AA seq
775 aa
AA seq
DB search
MLTAFYYDRLISLNTIDRQELQKIYEAGKNGFLACSVCGEAVKLYLGLKNTPYFYHYSAK
QPCMTESSTIEQEQAAAADIDYEEKNGFRIPKSRNISKDNTEITPFRPPMSIKAITHTSD
VAASQTVTFPQESYLNTLKQNCYSLDITQSEAVAIDDGPILVLAGAGSGKTRVLTMRAAY
LIQEKKVDPSTIMLVTFTNKAANEMKERLLHYPMMNKGIVQKIVSGTFHSILYQILIFHE
REKWQRNKLLSSNWQRELLLKEIAREKQLDEKDFPFDAALQLIGAWKNSMLFPHEIEPDN
DWEKKVAQLYSGYETKKQQRNLYDFDDMLLGGYHFFLENPAILATYQKRFTHFLLDEFQD
INKVQYEWMKLMARSAHSVYAVGDDDQSIYSFRGSDPKYLLDFEKDYPNAKTIILDYNYR
SSQEIVSIAKSTISKNTKRRAKKMITGYSGQTPIAFYPYDEEEEATMILTDIQEKIKTGY
EPKDFAILFRTNTNSRAMFERLASSSLPFRLEQDTGSFYQRFIVKSMMAYLKLIHDPDNQ
QAVADILPTLFLKKTVLQDIKAISILEDCSFLDCLVFIKTGFAFQESRLKKIPEIVKRLI
RYSPLDAINYIEKELGFQEFIKKRGNEGNQWDKGSDDIRDLKVVARKFQSIKEFVQYTDH
MTAMNEELRKQYKNEENVITLSTIHRAKGLEYKTVYIVGTVDGSIPHDFALESFRNNNFM
PIEEERRLLYVAMTRAQQELYLSVPMYLRGKKAKTSRFLSPLSMVAIKAAEKERS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagctttttattatgatagacttatttcattaaataccattgacagacaagaa
ttacagaaaatttatgaagctggcaaaaatggatttctcgcatgttctgtatgcggagaa
gcagtaaagctttatttaggattaaaaaatactccctatttttatcactattcagctaaa
cagccctgtatgacagaatcatctactattgaacaggaacaagctgctgcagctgatatc
gattacgaagaaaaaaatgggttccggattcctaagagtagaaatatttccaaagacaat
acagaaattactccttttagaccgcctatgtctataaaggcgattacccatacatctgat
gtcgctgctagtcaaacagttacttttccacaagaatcttatttaaatacactgaaacaa
aactgctattctcttgatattacacagagtgaggctgtcgcaatagatgatggacccatt
ctagtccttgcaggtgccggtagtggcaaaacccgagtgttaacaatgagagcagcttat
ctcatccaagagaaaaaggtagatccgtcaaccatcatgctcgttaccttcaccaataaa
gcagcaaatgaaatgaaggaaagactcttacactatccaatgatgaataaagggattgtg
caaaaaattgtttctggaacttttcatagtattctttaccaaattttaatctttcatgaa
cgggagaaatggcagcgaaataaattattaagcagtaattggcagcgagagcttttgtta
aaggaaattgcccgtgaaaagcaattagatgaaaaagacttccctttcgatgcagctctt
caattaatcggtgcatggaaaaatagtatgctttttcctcatgaaatagagcctgataat
gactgggaaaagaaggttgcccaactatatagtggctatgaaacaaaaaaacaacagcga
aatttgtatgactttgatgatatgcttcttggaggctatcatttctttcttgaaaatcca
gctattttagcaacttatcaaaagcgttttactcatttcttattagatgaatttcaagac
atcaataaagttcagtacgaatggatgaagctaatggcaaggtcagctcattctgtctat
gcagtaggagatgatgatcaatctatctattcttttcgtggtagtgatccaaaatacctt
ttagattttgaaaaagattatccgaatgctaaaacgattattcttgattacaattaccgc
tcttctcaagaaattgtatccatcgctaagtctacaatcagtaaaaatacgaagagacga
gcaaaaaaaatgataactggctattcaggccaaacccccattgccttttatccttatgat
gaggaagaagaagctacgatgattttgaccgatattcaggagaaaataaagacaggctat
gaaccgaaggattttgcaattctctttcgaactaatacaaatagccgtgccatgtttgag
cgactggcttcttccagtctaccatttcgtttagaacaagatacaggttctttctatcaa
agatttattgtgaaaagtatgatggcctatttaaagctcattcatgatccagataaccag
caagcggttgccgatattctcccaaccctattcttaaaaaaaacggtattacaggatatt
aaagcaataagcatattagaagattgcagctttttagattgtctagtttttattaaaaca
ggcttcgcatttcaagaaagcagattgaaaaagattcctgaaatagtaaaacgattaatt
cgttattctcctctggatgctattaattatattgaaaaggaattaggctttcaggaattt
ataaaaaaacggggaaacgaaggaaatcaatgggataaaggctctgatgatattcgcgat
ttaaaagtggtggcacgtaaattccaatcgattaaagaatttgttcaatatacagaccat
atgactgctatgaatgaagaattacgaaagcaatataaaaacgaagaaaatgtaatcaca
ttaagcaccattcatcgcgcaaaaggtttagaatataaaacagtctatattgttggtacg
gttgatggttccattccccatgactttgcactagaatcattccgcaataacaacttcatg
ccgatagaagaagaacgccgccttctctacgttgccatgacaagggcacaacaagaacta
tatttatcggttcctatgtatttaagaggaaaaaaagcaaaaacttcgcgctttttatca
cccttgtcaatggttgctattaaagcagctgaaaaggaacggtcataa
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