KEGG   Niallia circulans: C2I06_02695
Entry
C2I06_02695       CDS       T06357                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bcir  Niallia circulans
Pathway
bcir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C2I06_02695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcir03019]
    C2I06_02695
Messenger RNA biogenesis [BR:bcir03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C2I06_02695
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 RMMBL DUF4453 pre-PUA_NIP7
Other DBs
NCBI-ProteinID: AYV65867
UniProt: A0A268FGR6
LinkDB
Position
complement(602447..604114)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTFL
EKNVDKIKGLFITHGHEDHIGGIPYLLRQVNIPLYGGKLALALVRNKLEEHGLLRQTTMH
EIQEDDIIKFRKTSVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEVPNFTMSEKKVGKSIHDTFIKADGRLIFATFASNIYRLQQ
VTDAAVEFGRKIAVFGRSMEAAINIGLELGFIKAPKETFVDPQQINRLPANQVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSNPVPGNTLSVNKTINQLYRAGAEVIHGPL
NNIHTSGHGGQQEQMLMLRLIKPKFFMPIHGEFRMQKTHAQTAVDCGVKEENCFIMDNGE
VLALSSDSAQVAGKIPSGNVYIDGSGIGDIGNIVLRDRRILSEEGLVVVVVSINMTDFRI
AAGPDLISRGFVYMRESGDLINDAQTLISKHLNKVMERKTTQWSEIKNEIIDTISPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcaaactgctgtatttgccctaggaggattaggggaaatc
ggtaaaaatacgtatggtgtccagtttcaagatgaaattattttaattgatgctggaatt
aaatttcctgaggacgagcttttaggaattgactatgttattcctgattatactttttta
gagaagaatgtagacaaaattaaaggcttatttatcacgcatggtcacgaagatcatatt
ggtggtattccttaccttttaagacaagttaatatccctctttacggaggcaaactggca
ttagcacttgttcgtaacaaattggaagagcatggattattgcgccaaacaacgatgcat
gaaattcaagaagacgatatcattaaatttagaaaaacatcggtttctttctttagaact
actcatagtatacctgattcctatgggattgttgtcaaaacaccacctgggaacattgta
cacactggagattttaaatttgactttacgccagttggggaacctgccaatttaacaaaa
atggctgaaatagggaaagaaggcgttttgtgcttattatctgatagtacaaatagtgaa
gttcctaattttactatgtcggagaaaaaagtcggaaaaagcatccatgatacttttata
aaggcggacggtagattgatttttgctactttcgcttccaatatttatcgcttacagcaa
gtaacagatgcagccgtagaatttggccgcaaaatagctgtttttggacgcagtatggaa
gctgctattaacatcggtttggaacttggctttataaaagcaccaaaagaaacttttgtt
gatccgcaacaaattaaccgactgccagctaatcaagtggtcatactttgtacaggaagc
caaggtgaaccaatggcagctctatcaagaattgctaatggtacgcatagacaaatccag
attatccctggtgacactgtggtattctcttccaatccagtaccaggtaatacattaagt
gttaataaaacaatcaatcaactttaccgagcaggtgcggaagtaattcatggaccactt
aacaatattcacacttctggtcatggtggtcaacaagagcaaatgctaatgcttcgatta
attaaacctaaattctttatgccaatccatggtgagtttagaatgcaaaaaacacacgct
caaactgctgttgattgtggcgtcaaagaagagaactgcttcattatggataatggtgaa
gtattagcactttcaagcgattcagcacaggttgcaggtaaaattccatctggaaatgta
tatattgacggaagcggaattggcgacattggaaatattgttttacgtgatcgtcgaatt
ctttcagaagaaggcttagtggttgtcgtggtgagtattaatatgactgattttagaatc
gccgctggacctgatcttatttcaagaggatttgtgtacatgcgtgagtctggtgattta
atcaatgatgcacaaacactaataagtaaacatttaaataaagtaatggaacgcaaaacg
acacaatggtcagaaataaagaatgaaataattgatactatttctccattcctatatgaa
aaaacaaaacgtcgcccaatgatccttcctattatcatggaagtataa

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