Niallia circulans: C2I06_03435
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Entry
C2I06_03435 CDS
T06357
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcir
Niallia circulans
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcir03032
]
C2I06_03435
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_03435
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C2I06_03435
DNA replication proteins [BR:
bcir03032
]
Prokaryotic type
DNA Topoisomerases
C2I06_03435
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C2I06_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AYV66004
UniProt:
A0A268FGH7
LinkDB
All DBs
Position
763199..765274
Genome browser
AA seq
691 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPKSQMGVDIEKQFEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLANSLNVDIESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDSQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIEREQ
EIKEFVPEEYWSIEGSFIKGKNNFEASFYGINGKKVELHSEDEVKKITSQLKDNKFTVDK
VSKKERKRNPAVPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQSEAYDYINSHYGKEYTREEKKQEKKNPKVQDAHEAVRPTSIGREPSKMK
EYLSRDQFRLYKLVWERFIASQMAPAVMDTMSVDLSNGNVLFRANGSKIKFPGFMKVYVE
GTDDNVDEKDRQLPDLKEGDVVLNKDIDTKQHFTQPPPRYTEARLVRTLEELGIGRPSTF
APTLDTIQKRGYVALDNKRFIPTELGEIVLELILEFFPEILNIEFTANMEQDLDNIEAGK
VNWVKVIDDFYKTFEKRLEVAEQEMQTIEIKDEPAGEDCEECGHPMVFKMGRYGKFMACS
NFPECRNTKAIVKDIGVKCPKCHEGNIIERKSKKRRIFYGCDRFPECDFISWDKPLQRPC
PKCENMLVEKKLKKGVQVQCVNCDYKEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattttttagtaatcgttgagtcaccagctaaagcaaagacaatagaacgatat
ttaggaaaaaaatataaagtgaaagcatcaatggggcacattagggatttgcctaaaagc
caaatgggtgttgatatagaaaaacaatttgagccgaagtacataactatccgtggaaaa
ggccctgtattaaaagaactgaaaacagcagcaaaaaaagccaaaaagatttatttagca
gctgacccggatcgtgaaggagaggcaattgcttggcatttagcaaatagcttaaatgtg
gatattgaatcagattgccgcgttgttttcaatgagataacaaaagatgccatcaaagaa
tcatttaagcatcctcgtgcaataaatatggatttagtagattctcagcaggctagaaga
gttttagaccgcttagtgggttataatatcagtccattattatggaaaaaagtaaaaaaa
gggcttagtgcgggaagagtacaatcagttgcagtacgtctcattattgaaagagaacaa
gaaattaaagaatttgtaccagaagaatactggtccattgaaggaagctttataaaagga
aaaaataattttgaagcatctttttatggtatcaatggaaaaaaagtcgagttgcattca
gaagatgaagtgaaaaaaattactagtcagttaaaagataataagtttactgtcgataaa
gtgagtaaaaaagagcggaagagaaaccctgccgttccatttacaacttcttctttacag
caggaagctgcccgcaaattgaatttccgagcaaagaaaacaatgatgttagcacagcaa
ttatatgaaggtatagatcttggtaaagaaggaacagtgggtttgataacctatatgaga
acggattccactagaatatcagaggttgcacaaagtgaagcatatgactatataaatagt
cattatggcaaagagtatacacgtgaagagaagaaacaagagaagaaaaatccaaaggtc
caagatgcccatgaagcagtccgtccaactagcattggtcgtgagccgagtaagatgaag
gaatatttatctcgagatcaatttcgattgtataagctagtgtgggaaagatttattgcc
agccaaatggctccggcagttatggatacaatgagtgtggatttatcaaatggtaacgta
ctttttcgtgctaatggttcaaaaattaagttcccaggttttatgaaggtatatgtggag
ggtacagatgacaacgttgatgagaaagatcgacaactcccagatttaaaagaaggagat
gttgtcttaaataaggatattgatacaaagcagcatttcactcagccacctccacgttat
acagaagcaagattagttagaacactagaggaattgggaataggaagaccatctacattc
gcaccaaccttagatacgattcaaaaacgaggatatgtggcccttgataacaaacgattt
attccaacggagcttggggaaattgttttagagttaattttagaatttttcccggaaata
ttaaatattgagtttacagccaatatggaacaagacttggataatattgaggcgggcaag
gtcaattgggtaaaggttatcgacgatttttataaaacgttcgagaaaagactggaagtt
gcagaacaagagatgcaaaccattgaaatcaaagatgagccagctggagaggattgcgaa
gaatgtggccacccgatggtatttaaaatgggccgttatgggaaatttatggcatgtagt
aattttccagagtgtagaaacacgaaagcaatcgtgaaggatattggagtgaaatgtccg
aagtgccatgaaggaaatataattgaaagaaaaagtaaaaaacgtagaattttttatggt
tgtgatcgattcccagaatgtgacttcatttcatgggataaaccactacaaagaccatgt
ccaaaatgtgaaaatatgttagtggagaaaaaattgaaaaaaggtgttcaagtacagtgc
gtaaactgtgactacaaagaagaaccacaaagctaa
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