Niallia circulans: C2I06_06205
Help
Entry
C2I06_06205 CDS
T06357
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcir
Niallia circulans
Pathway
bcir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2I06_06205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcir03019
]
C2I06_06205
03009 Ribosome biogenesis [BR:
bcir03009
]
C2I06_06205
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2I06_06205
Messenger RNA biogenesis [BR:
bcir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2I06_06205
Ribosome biogenesis [BR:
bcir03009
]
Prokaryotic type
rRNA helicases
C2I06_06205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AYV66500
UniProt:
A0A268FHG6
LinkDB
All DBs
Position
1317205..1318542
Genome browser
AA seq
445 aa
AA seq
DB search
MQSFTDIGLSSTIIEKLHKQGIKQPTPIQAKVIAPLLKGSDVIAQAQTGTGKTFAFILPI
LEKMIIDANHIQTLILTPTRELAIQITNEIMKMKQEAVNVLAVYGGQDVDKQLKVLQKDV
SIVVATPGRLIDHIKRGTIDLSKISYFVLDEADQMLHIGFLEEISYIMRRIPKSRQTMLF
SATISREVEKLAKKYTKNADYFTVEAKQGPAKTVKQVSIHTTDRAKQGTLMTLVKEANPY
MAVIFCRTKRRVTKLYEVLLANKFSCGQLHGDLSQTKREQVMKAFRDGKFQLLIATDVAA
RGLDIDGITHVYNYDIPQDAESYVHRIGRTGRAGTEGYAVTFYSSDDRPLLDSIENQLDI
KIEKIQQPKKTDSTKQSEESKPAKKPYKKQSHTKKKDEVIRSSQSDKKGSDNKRKSFSTN
NKHRGNSSQSPTKKWAKPKKRDGKR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcatttacagacattggattgtcttcaacaattattgaaaaacttcataaacaa
ggaataaaacagccaacccctattcaagcaaaggttattgcaccactccttaaaggaagc
gatgtaattgcgcaagcacaaacaggtacaggaaagacttttgcttttatattgccgatt
ttagaaaaaatgattatcgatgcaaatcatatacaaacactaattttaaccccaactaga
gaacttgctattcagataacgaatgaaatcatgaaaatgaaacaggaagcagtaaatgtt
cttgctgtatacgggggacaagatgtcgacaaacagttgaaagtcttacaaaaagacgtt
tccattgtcgtagcgacaccaggaagattaattgaccatataaaacgaggaacaattgat
ttaagcaaaatctcctattttgttttagatgaagcagatcaaatgcttcatattggcttt
ttagaagaaattagctatattatgcgacgtatccctaagtcaagacaaacaatgctattt
tccgcgactatttcaagggaagtcgaaaaacttgcgaagaaatatacgaaaaacgccgac
tattttactgttgaagcaaaacaaggaccagcaaaaaccgttaagcaagtaagtatacat
acaactgatcgtgccaagcaaggtacattaatgaccttagtgaaggaagcaaatccgtat
atggcagtcattttctgcaggacgaaacgtcgagtaactaaattatatgaagtattgctc
gcaaataaatttagctgtggtcaattacatggggatttatcgcagacaaaaagagagcaa
gtaatgaaagcatttcgtgatggaaaattccaattgttaattgcgacagatgtagcagca
agaggcttagatattgatggaattacacatgtatataattatgatattccgcaagatgcg
gagtcttatgtccaccgaatcggcagaacaggaagagctggtacagaaggatatgcagtt
accttttattcatctgatgatagaccattgttagattcaatagagaatcaattagatata
aaaatagaaaaaatacagcaacccaaaaagacagattcaactaaacaaagcgaagaatct
aaaccagcgaaaaagccatacaaaaaacaaagccatacaaaaaagaaggacgaagttatt
cgttcgtctcaatcagataaaaagggaagtgacaataagcgtaagtcattttcaacaaac
aataaacataggggtaattcaagtcaatccccaacaaaaaaatgggcgaaacctaaaaaa
cgagatggaaaaagataa
DBGET
integrated database retrieval system
