Niallia circulans: C2I06_09885
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Entry
C2I06_09885 CDS
T06357
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bcir
Niallia circulans
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcir03019
]
C2I06_09885
03009 Ribosome biogenesis [BR:
bcir03009
]
C2I06_09885
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2I06_09885
Messenger RNA biogenesis [BR:
bcir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2I06_09885
Ribosome biogenesis [BR:
bcir03009
]
Prokaryotic type
rRNA helicases
C2I06_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYV67160
LinkDB
All DBs
Position
complement(2028092..2029402)
Genome browser
AA seq
436 aa
AA seq
DB search
MSNNLFNQYELKPFIIDAIDELGFYEPTEIQQKVIPLVLKGESAIGQSQTGTGKTHSYVL
PIIEKINPEKQAVQAVITAPTRELANQIHQEIQKITKHSAQPISSRLFIGGTDKQRSIEK
LKTQPQIVVGTPGRINDLVNEQALFVHTAKILIVDEADLMLDMGFIEDVDQIAAKMPKDL
SMFVFSATIPEKLKPFLKKYLENPTFIHIEPKQLTAAKIEHVLIPSRHRDKITTVYEALV
SFNPYLAIVFTNTKQMCDEVANGLSSKGLKVARIHGGLTPRERKKVMKQILDLEFQYIVA
TDLAARGIDIKGISHVINYELPSDLDFYVHRVGRTARAGYSGIALTIYEPSDEDKLNQLE
KLGVEFKHMDLKKGEWIELDDRNRRKNRKKQVDEIDLKAKSLVKKPKKVKPGYKKKMQQQ
VETIKKREKRIKSRRK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatctatttaaccaatatgaattaaaaccatttattatagatgcaattgat
gaattaggtttttatgagccaacggaaattcagcagaaagtcattccgcttgtcttaaaa
ggggaaagcgctattggtcagtcgcaaacaggaacaggcaaaacgcattcttatgtattg
ccgatcattgaaaaaatcaatccggaaaagcaagcagtacaagcagttattacagcgccg
acaagagaattggctaatcaaatccaccaagaaatacagaaaattacgaagcattccgcc
cagccgatttcttcgcgattatttattgggggaacggataaacaacgttcgattgaaaaa
ttaaaaacacagccacaaattgttgttggaacgccaggaagaattaatgatcttgtcaac
gagcaggcattatttgtgcatacagcaaaaatccttattgtcgatgaggcagatctgatg
ctagatatgggctttattgaagatgtggatcaaattgctgcaaaaatgcctaaagattta
agtatgtttgtgttctcagcaacaatacctgagaaattaaaacctttcttaaagaaatat
ttagaaaatccaacctttattcatattgagccaaagcagttaacggcagcaaaaattgaa
cacgtattaattccttcgagacatcgagataaaattacaacggtatatgaggcattagta
agctttaatccttatcttgctattgtatttacgaatacaaaacaaatgtgtgatgaagtt
gcaaatggattatcaagtaaaggtcttaaagttgctagaattcatggtggcttaacacct
cgcgaacgtaaaaaagtaatgaagcaaattcttgatttagagtttcaatatattgtggca
acagacctagcagcaagaggaatagatattaaaggaatcagtcatgttatcaactatgag
cttccgtcagacttagatttttatgtacaccgtgttggtagaacggccagagctggatat
tcaggcattgcattaacgatttatgagccttccgatgaggataaacttaatcaattagaa
aaactaggcgttgaatttaagcatatggatctaaaaaaaggtgagtggattgaattagat
gatcgcaatcgtcgtaaaaaccgcaaaaaacaagtagatgaaattgatttaaaggctaaa
tctcttgtcaaaaaaccgaaaaaagtgaaaccgggctacaagaagaaaatgcagcagcaa
gtagaaacaattaaaaagagagaaaagcgtattaagagtagaagaaaatag
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