Niallia circulans: C2I06_13495
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Entry
C2I06_13495 CDS
T06357
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bcir
Niallia circulans
Pathway
bcir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2I06_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_13495
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2I06_13495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2I06_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
nSTAND1
RsgA_GTPase
AAA_22
nSTAND3
AAA_18
Viral_helicase1
ATPase_2
DnaJ_CXXCXGXG
MMR_HSR1
cobW
NACHT
NB-ARC
BCA_ABC_TP_C
PRK
NTPase_1
T2SSE
MeaB
IIGP
Septin
DUF463
Motif
Other DBs
NCBI-ProteinID:
AYV67801
LinkDB
All DBs
Position
complement(2761907..2764783)
Genome browser
AA seq
958 aa
AA seq
DB search
MAKDKLIVKGARANNLKNIDITIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGRP
TCPEHGIEISSQTIEQMVDRILEYPERTRLQVLAPVVSGRKGTHVKILEDVKKQGYVRLR
IDGEMFEIGDDISLEKNKKHNIEVVIDRLVVKEGITARLADSLESALQFGNGKVIIDVMG
QEELLFSEHHACPICGFSISELEPRLFSFNSPFGACPDCDGLGNKLVVDVDLVIPDWNLT
LKENAIAPWESISSQYYPQLLESVCNHYGIDMNIPVKNIPKNLMDKILYGSGKEYIHFRY
ENDFGQVRENDIQFEGVMKNVERRYKETSSDYIREQMQKYMAEQPCRTCKGYRLKKEALA
VLINGQHIGKITEKSVVECYEFMEKVDLTDKEKQIANLILREIKERVGFLINVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDKLIDTLRQMRDIGNT
LIVVEHDEDTMMAADYLIDVGPGAGVHGGEIISVGTPKEVMNDPQSITGQYLSGKKFIPL
PLERKQSDGRYIEITGAKENNLKNVNVKIPLGMFIAVTGVSGSGKSTLINEILHKGLAQK
LNRAKAKPGAHKEIKGIEQLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFATTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKG
KNISDVLEMTVEDGVSFFENIPKIHRKLQTIVDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHRRSTGKSFYILDEPTTGLHVDDISRLLIVLQRLVENGDTVLVIEHNLDVIKTADYII
DLGPEGGDKGGTILGTGTPEDIANLKGSYTGKYLKPILDRERQRMKNSIEEAEKIATT
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagataaacttatcgtaaaaggtgcacgtgcaaataatttaaaaaatattgat
ataacaataccgagagatcaattagtagtgataactggtttatctggttcaggaaagtct
tctcttgcttttgatacgatttatgcagaaggacaaagaagatatgtagaatctttatct
gcctatgctcggcagtttttaggacaaatggataagcctgatgttgattcaatagaaggc
ttatctcctgctatttctattgatcagaaaacgacaagtcgaaatcctcgttctactgtg
gggactgtaacagaaatttatgattatttgagattattatttgcgagggtaggaagacca
acttgtccagagcatggtattgaaatttcttctcagacaatagaacagatggttgaccgt
attctcgaatatcctgagagaactagactgcaagtacttgcgccggttgtatcagggcgc
aagggaacacatgtgaaaatacttgaagatgtaaaaaaacaagggtatgttcgtttgcgc
atcgatggagaaatgtttgaaattggtgatgatatttctctagagaaaaataagaaacat
aatattgaagtagttatcgatcgacttgttgtcaaagagggaataactgctcgtctggca
gattcattggaatcagccttacaattcgggaatggaaaagtcattattgatgtgatggga
caagaggaattactgtttagtgagcatcacgcttgtccaatttgcggtttctctattagt
gaattagaaccaaggctattttcttttaatagtccatttggagcttgtccagattgtgat
ggtctaggaaataaactagttgtagatgtagatttagttattcctgattggaatttaact
ttaaaggaaaatgcgatagctccttgggaatctattagttctcaatactatccacagctt
cttgaaagtgtatgtaatcattatggaattgacatgaatatacctgtaaagaacattccg
aagaatttaatggataaaatcctttatggatctggaaaggaatatatccatttccgctat
gaaaatgactttggccaagtgagagaaaatgatatccaattcgaaggcgttatgaaaaac
gtggaaagaagatataaagaaactagttctgactacatccgtgagcaaatgcaaaaatac
atggcagaacagccttgtcgcacatgtaaaggatatcgcctaaagaaagaggctttggct
gttttaattaacggacagcatatcggcaaaattactgaaaaatcagtggtggaatgctat
gaatttatggagaaggttgatttaacagataaagaaaaacaaattgctaacttgattctt
cgagaaataaaagaaagagttggatttttaatcaatgttggattagattatctaacacta
agtagagcggcaggaactttatcaggtggagaagcccaaagaattcgtttagcaacacaa
atcggttcaaggcttacgggtgttctttatattttggacgagccttccattgggcttcat
caaagagataatgataaattaatcgatacattaagacagatgcgtgatatagggaataca
ttgattgttgtagaacatgatgaagataccatgatggctgctgactatttaattgatgtt
ggtccaggtgcgggtgtccatggtggcgaaattatttctgtgggaacgccaaaagaagta
atgaatgatccacaatcgataactggtcagtatttatctggaaagaaattcattccactt
ccattagagagaaaacaaagtgatggcagatatattgaaattactggggcaaaagaaaat
aatttaaaaaatgtaaatgtaaaaataccgctcggaatgtttatcgctgtgacaggggtt
tctggttcaggaaaaagtactttaattaatgaaattcttcataaaggcttggctcaaaag
ctaaatcgtgcgaaggcaaagccaggtgcccataaggaaattaagggaattgaacaattg
gaaaaagtcatagatattgaccaatccccaattggtcgaacaccaagatcgaatccggcg
acttatacgggtgtgtttgatgatatacgtgatgtttttgcgacaaccaatgaagcaaag
gtacgcggttataaaaaaggacgttttagttttaatgttaaaggtggaagatgcgaagca
tgccgcggagatggaatcataaaaattgaaatgcatttccttccagatgtttatgttcca
tgtgaagtttgtcatggcaaacgatacaatagggaaacattagaagtgaaatataaagga
aaaaacatctccgatgtattggaaatgacagtggaagatggtgtatccttcttcgaaaat
ataccgaaaatccatcgtaaattgcaaacaattgtggacgttggtttaggttatattaaa
ctcggacagccagcgactactttatcaggtggagaggcacaaagggtaaaactagcgtca
gaattacaccgtcgatctaccggaaagtctttttatattttggatgagccgacaacaggc
ttacacgttgatgatatttcaagactattgattgttcttcagcgactagtcgaaaatgga
gatacagtactagttattgaacataatctcgatgtcattaagactgctgattatattatc
gacttaggaccagaaggcggagataaaggtggcacaatattaggaacagggactcctgaa
gatattgccaatctaaaagggtcttatacagggaaatatttaaagccgatcctagataga
gagcggcaaagaatgaagaatagtatcgaagaagcggaaaaaatcgctacaacttaa
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