Niallia circulans: C2I06_13835
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Entry
C2I06_13835 CDS
T06357
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bcir
Niallia circulans
Pathway
bcir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C2I06_13835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcir02000
]
C2I06_13835
Transporters [BR:
bcir02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C2I06_13835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AYV67860
LinkDB
All DBs
Position
complement(2846517..2847686)
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AA seq
389 aa
AA seq
DB search
MKKHRWPFLTIIMTISLLLSACGGAEKSSGGKNGKITLTIYSAAGGDEYYKDIVIPMFEE
ATDGKYNVEYGRGTPQEVINKIKTQGKNGTIDLVVTGLDGLPLGIKEGLWEKILPEYSEE
THSAEWNEIGQEYIDKFEGYGAPVTTGSGGPILMYNTKTVKNPPKTYEELRKWIKENPGK
FTYPAVPSSGPARGFFFGLIQAMGEDLNNPSSLDKTWDYLEEIGETIEYYPAKTSDSFDL
LYEGAVDIVPHIPFWYADNKAIKTIPPHIEAVKLEDAKQVIDSQFYVMVKDLPEDRKNAA
LEFLKFATSKEIQAQGYVRGFLPANSLATPDMLEPKYQKSYETLVESVMPEFKEGDKMKV
PDGEWILFPDLEETNELYGLWEEKIQALK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagcatagatggccttttttaacaataatcatgacaattagtttattactatct
gcatgcggaggagctgaaaaaagttctggaggaaaaaatggtaaaataacgcttacgatt
tattcggccgctggtggagatgaatactataaggatattgttataccgatgtttgaagaa
gcaacagatggaaaatacaacgtggaatatggtcgaggtacaccccaagaagtaatcaac
aaaataaaaacacaaggtaaaaatggaaccattgatctagtggtgactggtttagatggt
cttccacttggcattaaagaaggcttatgggaaaagatattacccgaatactcagaagag
actcattctgcagaatggaatgaaattggtcaggagtatattgataaattcgaaggctat
ggtgcaccagttacaactggttctggtggtcctatcttgatgtataacacaaaaacagtt
aaaaacccaccgaaaacatatgaagaattaagaaagtggattaaagaaaatccaggaaaa
tttacataccctgcagttccatctagtggtccagcacgaggattcttctttggtcttatt
caagcaatgggagaagatttaaataatccaagctcattagataaaacgtgggattattta
gaagaaattggagaaacgattgaatactacccagcaaaaacatctgactcctttgatctt
ctttatgagggagcagtagatattgtaccgcacatcccattctggtatgcggataataaa
gcgattaaaacaatcccgccgcatattgaagctgtgaaattggaggatgccaaacaagtt
atcgattctcaattttatgtaatggtaaaagatttaccagaagatcgtaaaaatgctgcg
ctcgagtttctaaagtttgctacttcgaaggaaatacaagcacaaggatatgttcgaggc
ttccttccagcaaatagtctagcaacacctgatatgctagaacctaaatatcaaaaatca
tatgaaactctagtggagtccgtaatgccagagtttaaagaaggcgacaaaatgaaagtt
ccagacggagaatggatactattcccagacttagaagagaccaatgaattatacggtctt
tgggaagaaaaaattcaagcactcaaatag
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