Niallia circulans: C2I06_19560
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Entry
C2I06_19560 CDS
T06357
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcir
Niallia circulans
Pathway
bcir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2I06_19560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcir03021
]
C2I06_19560
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_19560
Enzymes [BR:
bcir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2I06_19560
Transcription machinery [BR:
bcir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2I06_19560
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2I06_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AYV68884
UniProt:
A0A0J1L5E6
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All DBs
Position
4081614..4082558
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEINDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTAIILNIKKLALKIYSDDEKTLEIDMQGAGVVTAADITHDSDVEI
LNPDLHIATLGSNGNFRMRLTAKRGRGYTPAEQNKREDQPIGVIPIDSIFTPVSRVSYQV
ENTRVGQLTNYDKLTFDVWTDGSTGPQDAIALGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
HKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgagatcaacgatgatgctaagtat
ggtaagttcgtcgtagagccacttgagcgtggatatggtactactttgggtaactcctta
cgtcgtattctactatcctcactgccaggtgccgctgtcacatccattcaaattgatggg
gtacttcatgagttctcaactattgaaggcgtcgtagaagatgttacagctatcatatta
aatatcaaaaagctagcattgaaaatatactctgatgatgaaaaaactttagagattgat
atgcaaggtgcaggggtagtaacagcagcagacattacacatgatagtgatgtagagatc
ttaaatccagatcttcatatcgcaactttagggagtaacggaaatttccgcatgcgttta
actgcaaagcgtggccgtggatacacaccagcagagcaaaacaaacgtgaagatcaacct
attggtgtaattcctattgactctatctttacgccagtatctcgtgtttcttatcaagta
gagaatactcgtgttggtcaattgactaattatgataagttaacttttgacgtgtggact
gacggtagtacaggtcctcaagatgctatcgcacttggtgcaaagattttaactgagcat
ttgaatatctttgttgggttaactgacgaagcacaaaatgctgagattatggtagaaaaa
gaagaagatcaaaaagaaaaagttcttgagatgacaatcgaagaattagatctttctgtt
cgttcttataactgcttaaaacgtgctggtattaataccgtacaagaattagcgaataag
acggaagaagatatgatgaaagttcgaaacttaggtagaaaatctcttgaagaagtaaaa
cataaattagaagagcttggattaggattaagaaaagacgactga
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