Niallia circulans: C2I06_21790
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Entry
C2I06_21790 CDS
T06357
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcir
Niallia circulans
Pathway
bcir03420
Nucleotide excision repair
bcir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2I06_21790 (pcrA)
03430 Mismatch repair
C2I06_21790 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_21790 (pcrA)
Enzymes [BR:
bcir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2I06_21790 (pcrA)
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2I06_21790 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C2I06_21790 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
RasGEF
Motif
Other DBs
NCBI-ProteinID:
AYV69258
UniProt:
A0A268F749
LinkDB
All DBs
Position
4558713..4560944
Genome browser
AA seq
743 aa
AA seq
DB search
MQFLTDKILNGLNPEQKEAVKATDGPLLIMAGAGSGKTRVLTQRIAYLMVEKGVNPYNIL
AITFTNKAAKEMRQRIAAVLGGASEEIWISTFHSMCVRILRKDIDRIGYNRNFTILDTTD
QQSVIKGILKDRNIDPKKYDPRAILASISSSKNELVTPEEFAKTAGDYFSQIVSDVYTEY
QRRLRKNQALDFDDLIMQTINLFQRVPEVLEYYQRKFQYIHVDEYQDTNRSQYMLVKLLA
SRFRNLCVVGDSDQSIYAWRGADISNILSFEKDYPNAKVVMLEQNYRSTKRILQAANQVI
ANNSSRKDKNLWTENEDGSKIYYYRADSEQGEAQFVIGKIQELRRESSLNLSDIAILYRT
NAQSRVMEEMLLKANIEYSIVGGIKFYDRKEIKDTLAYLRLIANPDDDISFQRVINVPKR
GIGSSSVDKIANFAAMHDMSMYQALEAVELIGLSPKITKAASEFRDLIQNYTRMQEYLSV
TELVEEVIDKSGYVDMLKAEKSIEAQSRLENIEEFMSVSKNFEEANDDKSLIAFLTDLAL
VADIDKLDDDGNQADSVVLMTLHSAKGLEFPIVFLIGLEEGVFPHSRSLMEETEMEEERR
LAYVGITRAEKQLYLTNAQMRTLFGRTNMNPPSRFVKEIPEDLLEGLNPVSNRQRMASPQ
NSSRSSYTQQQPTRKAVIRPAAVATGGEGIGWSIGDKAVHGKWGTGTVVSVKGEGDSKEL
DIAFPSPVGIKRLLAKFAPIQKG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagataaaattttaaatggattaaatcctgagcaaaaggaagcagta
aaagcaacagatggccctctcttaataatggcaggggcaggaagtggaaaaacccgagtt
ttaacacagagaattgcttatcttatggtggaaaagggagtcaatccatacaatatctta
gcaattacgtttaccaataaagcagcgaaggaaatgcgtcagaggatagcagctgtttta
ggtggagcaagcgaagaaatatggatatcaacttttcactctatgtgtgtacgtattttg
agaaaagatattgatcgaattggatacaatcgtaattttacaatattggatacgactgat
cagcaatctgttattaaaggtattttaaaagaccgtaatatcgatccgaagaaatatgat
ccccgtgctattcttgcaagtattagttcttccaaaaatgaacttgtaactccagaggaa
tttgcgaagactgctggtgattacttctcacaaatagttagtgatgtatatacagaatat
caaagacgtttacgaaagaaccaagcattagattttgatgatctaattatgcagaccatt
aatctttttcaaagagtaccggaagttttggaatactatcaacgtaaatttcagtatatt
catgtggatgagtatcaggatacgaatagatcgcaatatatgctggtcaagcttctagca
agtcgattccgcaatttatgtgtagttggtgattctgatcagtctatttacgcatggcgt
ggtgcagatatttcaaatatcctttcttttgaaaaggattatccaaatgcaaaagtagta
atgctggaacaaaattatcgttccaccaaaagaattctacaggcagcaaaccaagtcatt
gctaataactctagccgtaaagataaaaacttatggacagagaatgaagacggaagcaaa
atttactattatcgagcagatagcgagcaaggagaagcacaatttgttattgggaaaatt
caagaattaagaagagaaagctctttgaatttatcagatatagctattctgtatcgaaca
aatgcacaatctcgtgttatggaggaaatgcttcttaaagccaatattgaatattcgatt
gttggaggtataaagttctatgatcgaaaggaaattaaggatacgcttgcttatcttcgc
ttaatcgctaatcctgacgatgatattagttttcaacgagtgattaatgttccaaaacgt
ggaattggctctagttctgttgataagattgccaatttcgcagcaatgcatgatatgtct
atgtatcaagcattagaagctgttgaattaattggtttaagtccaaagattacaaaagct
gccagtgaattccgtgatttgattcaaaattatacaagaatgcaggaatacttatctgta
acagaacttgtcgaagaagttattgataaatctggttatgtagatatgctaaaggcagaa
aagtcgattgaggctcaaagtagattagaaaacattgaagaatttatgtccgtatcgaag
aactttgaggaagctaacgatgataaatcgttaattgcattcttaacagatttagcattg
gttgctgatattgataagttagatgatgacggaaatcaagcggattcggttgtcttaatg
accttgcactctgcaaaaggtttggaattcccaattgttttcttaattggtctggaagaa
ggtgtgttccctcattcccgttcattaatggaagaaacggaaatggaggaagaacgacgc
cttgcatatgtaggcattacgcgagctgaaaagcaattatatttaaccaatgcacagatg
agaacgttatttggacgtaccaatatgaatccaccttctcgttttgtaaaagaaattcca
gaagatttactagaaggattaaatccagtttcaaataggcaaagaatggcttctcctcaa
aatagtagtcgaagctcttacacacaacaacagccaacaagaaaggctgttattcgtcct
gcggcagttgcaacaggcggtgaaggaatcggatggagtataggcgataaagcagtccat
ggaaaatggggcactggtacagttgtaagtgtaaaaggcgaaggcgattcaaaagaatta
gatattgcttttccgagcccagtagggattaaacgattattggctaaatttgcaccgatt
caaaaaggataa
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