Niallia circulans: C2I06_22340
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Entry
C2I06_22340 CDS
T06357
Name
(GenBank) transcriptional regulator
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
bcir
Niallia circulans
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcir03000
]
C2I06_22340
Transcription factors [BR:
bcir03000
]
Prokaryotic type
Helix-turn-helix
XRE family
C2I06_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
SinI
HTH_25
SGT1
HTH_AraC
DUF6626
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AYV69363
LinkDB
All DBs
Position
complement(4680832..4681161)
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AA seq
109 aa
AA seq
DB search
MLVGAKIKTLRIKKGFSINELSDKSGVSKSYLSYIERGIQKNPSLQVLTKLAHSLETNVE
ELLDNNHTVIEGIDEDWMSLVEEAIEEGITKEDFAGILEYVKFKKRQEN
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgctggttggagcaaaaataaagacattaagaataaaaaaaggcttttctattaatgaa
ctttccgacaaatctggtgtttccaaatcttatttaagttatattgaaagaggaattcaa
aaaaatccctctcttcaagtattaacgaaacttgcccactctcttgagacaaatgtggag
gaactactagacaataatcacacagtgatagaaggcattgatgaagactggatgagtttg
gtagaagaggcaattgaagaaggaatcacaaaagaagattttgctggcattcttgaatat
gttaaatttaaaaaaagacaagagaactag
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