Niallia circulans: C2I06_22355
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Entry
C2I06_22355 CDS
T06357
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
bcir
Niallia circulans
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcir03000
]
C2I06_22355
Transcription factors [BR:
bcir03000
]
Prokaryotic type
Helix-turn-helix
XRE family
C2I06_22355
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_31
HTH_19
HTH_26
KorB
HTH_25
MerR_1
HTH_10
Phage_CI_repr
Sigma70_r4
HTH_IclR
HTH_37
USH1C_N
Motif
Other DBs
NCBI-ProteinID:
AYV69366
UniProt:
A0A0J1IL79
LinkDB
All DBs
Position
complement(4682333..4682656)
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AA seq
107 aa
AA seq
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MIGDRVKQLRLEKRMSLSELAEQAGVAKSYLSSLERNLQSNPSIQFLEKIAAVFNIPVDH
LINDQQNKDELDSEWLKIVKEAMDSGVSKKEFREFLEFNRWRLEQKK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgattggggatcgtgtaaaacagctacgtttagagaagagaatgtccttgtcagaatta
gctgaacaagccggagttgcaaaatcttatttaagttccttggaaagaaatttacaatcc
aatccatcgattcagtttttagaaaaaatagcagctgttttcaatataccagtcgatcat
ttaatcaatgatcaacagaataaggatgagttagattctgaatggttaaaaattgtaaaa
gaggcaatggattctggagtatccaaaaaagaatttcgtgaatttttggaatttaacaga
tggagactggaacaaaaaaaataa
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