Burkholderia cenocepacia J2315: BCAL0228
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Entry
BCAL0228 CDS
T00771
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCAL0228 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcj03019
]
BCAL0228 (recQ)
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAL0228 (recQ)
Enzymes [BR:
bcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCAL0228 (recQ)
Messenger RNA biogenesis [BR:
bcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCAL0228 (recQ)
DNA repair and recombination proteins [BR:
bcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCAL0228 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAR50539
UniProt:
B4E5B4
LinkDB
All DBs
Position
1:267898..269745
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDVRVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPASWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLSTFGIGAALSEPEWRAIFRQ
LVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGARERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatactcgacgaagtctttggttattccgcctttcgcggccag
cagggcgagatcgtcgagcacgtcgccggcggcggcgattgcctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagattcccgcgctgctgcgccgcgaggccgggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgttg
agcgaagtcggcgtgcgcgcggcctacctgaattcgacgctgtcgggcgccgaggccgcg
gccaccgagcgcgcgctgcgcgaaggcgaaatcgacctgctgtacgtcgcgccggagcgc
ttgatgacggggcgcttcctcgagctgctcgagcgcgcgaagatcggcctgttcgcaatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggaatacatccagctg
tcggtgctgcacgagcgcttcccgtccgtgccgcgcatcgcgctgaccgccacggccgat
gcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgacgtgcgcgtgttcgtg
tcgagcttcgaccgtccgaacatccgttaccggatcgtcgaaaaggacaacgcgcgcgcg
cagctgctcgacttcatccgcgccgagcacacgaatgccgacggcacgaccgatgcgggt
gtcgtctattgcctgtcgcgccgcaaggtcgaggaaacggctgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgcggggatggaattcgaggtgcggcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagcccgacgtgcgcttcgtcgcgcacctcgatttgccgaagagcgtcgaaggc
tattaccaggaaaccggccgcgccggccgcgacgggatgcccgcgaacgcgtggatggcg
tatgggctgggcgacgtcgtccagcaacgcaagatgatcgacgagtccgatgcggacgac
gcacacaagcgcgtgcagacgtcgaagctcgatgcgctgctcgggttgtgcgagacgatc
tcgtgccgccgcgtgcggctgctgaattacttcggcgaggcgagccagccgtgcggcaac
tgcgacacgtgcctcgagccgcccgcgtcgtgggatgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggctcgagccacctg
atcgagatcctgcgcggcgggcgtaccgaaaaggtgttgcagcgcggccacgaccagctc
agcacgttcggcatcggcgcggcgctgtccgagcccgagtggcgcgcgattttccggcag
ctcgtcgcgtacggctacctggcggtcgaccatggcggcttcggcgcgctgatgctgacc
gaggccgcgaagcccgtgctgaagaacgaggaaaaagtcacgctgcgccgctacgtgaag
ccgcagcgcacccgccagtcgtcgagccgcagcggcacgcgcgtcgacccgacggccggc
atgggcgcccgcgagcgtgcgcggtgggacgcgctgcgcgcatggcgcgcggaaaccgcg
aagacggacggcgtgccggcctacgtgatcttccacgacgcgacgctcgccgaaatcgca
cgcaacgcgccggagacgatcgacgacctgcgccacattcccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgaatcggcctga
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