Burkholderia cenocepacia J2315: BCAL0260
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Entry
BCAL0260 CDS
T00771
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCAL0260 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcj03021
]
BCAL0260 (rpoA)
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAL0260 (rpoA)
Enzymes [BR:
bcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCAL0260 (rpoA)
Transcription machinery [BR:
bcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCAL0260 (rpoA)
DNA repair and recombination proteins [BR:
bcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCAL0260 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
CAR50571
UniProt:
B4E5E6
LinkDB
All DBs
Position
1:287861..288838
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgcgtgctgctgtcgtcgatggtaggctacgcgccgaccgaagtcacgatcgcaggc
gtggtgcacgagtactcgacgctggatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgagctggctcacgattgcgaagtc
atcaacccgaatcacgtgattgcgcacctgtcgaagggtggcaagctcgacgttcagatc
aagatcgaaaagggtcgcggctacgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcctcgttctcgccggttcgccgcgtgagc
tacgcggttgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgagacgagcggcgtgatcacgccggaagaagcgatccgccagtcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcgctggaaggcacggaaacggcagccgaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagctgacg
gttcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgagaactggccgccg
gctggtctcgacaagtaa
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