Burkholderia cenocepacia J2315: BCAL0428
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Entry
BCAL0428 CDS
T00771
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcj03016
]
BCAL0428 (trmE)
Transfer RNA biogenesis [BR:
bcj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BCAL0428 (trmE)
Prokaryotic type
Methyltransferases
BCAL0428 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
GTP_EFTU
Ras
Roc
DUF374
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAR50740
UniProt:
B4E7D7
LinkDB
All DBs
Position
1:472814..474208
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AA seq
464 aa
AA seq
DB search
MLATDSDPIVAIATAAGRGGIGVVRVSFGRGGEAAALPLIDALCGQKLAPRHASYVPFLD
AHGAPLDRGIALYFPAPHSYTGEHVLELQGHGGPIVMQLLLQRCLDAGRGFGLRLAEPGE
FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRQIHALVDDVITLRMLV
EATLDFPEEEIDFLEAADARGKLAKIRAQLAHVLGDARQGALLREGLSVVLAGQPNVGKS
SLLNALAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHIIDTAGLRETEDEVERIGIARTW
SEIERADVVLHLLDSRTGMTADDETIAARFPAGVPVVRVLNKTDLTGVPACVEHPAAEGD
LTEVHLSAKRGDGIDMLRAELLRIAGWQAGAEGVYLARERHLIALRAAQEHLAQAADHAE
QRAQSLDLFAEELRLAQEQLNAITGEFTSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctaccgattccgatccgatcgtcgccattgccaccgctgccggccggggcggc
atcggggtcgtccgcgtgtcgttcgggcgtggcggcgaggcggccgcgctgccgctgatc
gacgcgttgtgcgggcaaaagctcgcgccacgccacgcgagctacgtgccgtttctcgac
gcgcacggcgcgccgctcgaccgcgggatcgcgctgtatttcccggcgccgcattcgtac
accggcgagcacgtgctcgagctacaggggcatggcgggccgatcgtgatgcagctgctg
ctgcagcgctgcctggatgcggggcgcggcttcgggctgcggctcgcggaaccgggcgaa
ttcacgcggcgcgcgttcctgaacgataagctcgacctcgcgcaggccgaggctgtcgcc
gacctgatcgaggcgagcaccgaggccgcggcgcgctcggccgggcgttcgctcgacggc
gcgttctcgcggcagatccacgcgctcgtcgacgacgtgatcacgctgcggatgctggtc
gaggcgacgctcgattttccggaggaggaaatcgacttcctcgaagcggccgacgcgcgc
ggcaagctcgcgaagatccgcgcgcaactcgcgcacgtgctcggcgatgcgcgtcagggc
gcgttgttgcgtgaagggctgtcggtcgtgctcgcggggcagccgaacgtcggcaagtca
tcgctgctgaatgcgctggcgggcgccgagctggcgatcgtcacgccgattgccggcacg
acgcgcgacaaggtggcgcagacgatccaggtcgaagggattccgctgcacatcatcgat
acggccgggttgcgcgagacggaggacgaagtcgaacggatcggcattgcgcgcacgtgg
agcgagatcgagcgcgcggacgtcgtgctgcatctgctcgattcgcgcacggggatgacg
gcggacgacgaaacgatcgccgcgcggtttccggccggcgtgccggtggtgcgcgtgctg
aacaagacggacctgaccggcgtgccggcatgcgtcgagcatccggcggcggaaggcgat
ctgaccgaggtgcatctgtcggcgaaacgcggcgacgggatcgacatgctgcgcgcggag
ctgttgcggatcgcagggtggcaggcgggggccgagggtgtgtatctcgcacgcgagcgg
catctgatcgcgctgcgggccgcgcaggaacatctcgcgcaggcggcggatcatgcggag
cagcgtgcgcagtcgctcgatctgtttgccgaagagctgcggctcgcgcaggagcagctc
aatgcgattaccggggagttcacgtcggatgatctgctgggggtgattttcagcaggttt
tgtatcgggaagtga
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