Burkholderia cenocepacia J2315: BCAL2395
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Entry
BCAL2395 CDS
T00771
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcj03019
]
BCAL2395 (cafA)
03009 Ribosome biogenesis [BR:
bcj03009
]
BCAL2395 (cafA)
Messenger RNA biogenesis [BR:
bcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCAL2395 (cafA)
Ribosome biogenesis [BR:
bcj03009
]
Prokaryotic type
rRNA processing factors
BCAL2395 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAR52696
UniProt:
B4E5S3
LinkDB
All DBs
Position
1:2649893..2651362
Genome browser
AA seq
489 aa
AA seq
DB search
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRLAGEPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATSD
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYT
RLAEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaacctcacgccgcaggaaacgcgcgtcgcactcgtccag
caaggcgcggtgcaggagcttcacgtcgagcgcacgctgtcgcgcgggcgggtcggcaac
atctatctcggcaaggtcgtgcgcgtgctgcccggcatgcagtcggcgttcatcgacatc
ggcctcgagcgcgcggcgttcctgcacgtcgccgacatctggcatccgcgcctcgcgggc
gagccgcagtcgggcgcgccgcaccagccgatcgagaagatcgtgttcgaaggccagacg
ctgatggtccaggtgatcaaggatccgatcggcacgaaaggcgcgcggctgtcgacgcag
gtcagtatcgcgggccgcacgctcgtctacctgccgcaggaaccgcatatcggcatctcg
cagaagatcgaaagcgaggccgagcgcgaggccgtgcgcgcgcggctgaccgccgtgatc
ccgccggacgagaaaggcggctacatcgtgcggacgatcgccgaggacgccacctccgac
gagttggccggcgacgtcacgtacctgcgcaagacgtgggcgacgatcgtcgcgcaggcg
cagcggctgccggcgacaagcctgctgtaccaggatctcgatctcgcgcagcgcgtgctg
cgcgatttcgcgaacgacgacacgacgcgcatccaggtcgattcgcgcgagacgtacaca
cgtctcgcggagttcgcgggcgagttcacgccggccgtgagcccgaagctgcatcactac
acgggcgagcggccgctgttcgacctgtacaacatcgagacggagatccagcgcgcgctg
tcgcgccgcgtcgacctcaaatcgggcggttacctgatgatcgaccagaccgaggcgatg
acgacgattgacgtgaacacgggcggctatgtcggtgcgcgcaacttcgacgacacgatc
ttcaagaccaacctcgaggccgcgcacacgatcgcgcggcaactgcggctgcgcaacctc
ggcgggatcatcatcatcgacttcatcgacatggagaacgccgagcatcgcgacgcggtg
ctgtccgagctgaagaaggcgctctcgcgcgaccgcacgcgcgtgacggtgaacggcttc
tcgcaactcgggctcgtcgagatgacgcgcaagcgcacgcgcgaatcgctcgcgcacgtg
ctgtgcgaaccgtgcccgacctgccagggcaagggccaggtgaaaacgtcgcgcaccgtg
tgctacgacatcctgcgcgagatcctgcgcgaatcgcggcagttcaacccgcgcgagttc
cgcgtgatcgccgcgcagcaggtgatcgacctgttcctcgatgaagagtcgcagcatctg
gcgatgctgatcgacttcatcggcaagccggtgtcgctgcaggtcgagtcgaatctgagc
caggagcagtacgatatcgtgctgatgtaa
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