Burkholderia cenocepacia J2315: BCAL2412
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Entry
BCAL2412 CDS
T00771
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase 2
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCAL2412 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcj03019
]
BCAL2412 (rhlE2)
Enzymes [BR:
bcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCAL2412 (rhlE2)
Messenger RNA biogenesis [BR:
bcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCAL2412 (rhlE2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
aq_1923
RPC3_helical
Motif
Other DBs
NCBI-ProteinID:
CAR52713
UniProt:
B4E6D8
LinkDB
All DBs
Position
1:complement(2671767..2673251)
Genome browser
AA seq
494 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEMQTLKLDKPARHRHDERGGERGGERGGERGGRRDRDEHR
GASGRRSSGSAERGGHHRRHEAPVDDFFLKPYEPSASAKQPDDAQPAQQPEKKGPKRQVA
ALLGGFGMPRKPSA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcccgtcgacgcaaccttcgatcaattcggccttgccgcc
gatatcctgaaagccattgcggagcagggctatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcgtctgctgccgcaggccaacacgagc
gcgtcaccggcgcgccacccggtgcgtgcgctgatcctcacgccgacccgcgaactcgcc
gaccaggtcgccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagcgcggtg
gtgttcggcggcgtcgacatgaacccgcaatcggccgaactgcgccgcggcgtcgagatc
ctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagacggcgaacctcggc
caggtgcagatcctcgtgctcgacgaagccgaccggatgctcgacatgggcttcctgccc
gatctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgttgttctcggcc
accttctcgggcgaaatcaagaagctcgcgtcgacctacctgcgcaacccgcagacgatc
gaggtcgcgcgcagcaactcgacgaacgcgaacgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtgcagttgctgcgcgatcgcggcctcaagcaggtg
atcgtgttctgcaacagcaagatcggtgcgagccgcctcgcgcgcaatctcgagcgcgac
ggcgtggtcgcatcggcgatccacggcgacaagacgcagatcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcgcgcggt
ctcgacatcgccgagctgccggccgtgatcaacttcgacctgccgttcagcgcggaagac
tacgtgcaccggatcggccgtaccggccgcgcgggtgcgacgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgtccgctc
gaaatgcagacgctcaagctcgacaagccggcgcgccatcgtcacgacgagcgcggcggg
gagcgtggcggtgagcgcggtggcgaacggggcggccggcgcgatcgcgacgagcatcgc
ggggcatcgggccgtcggtcgtcgggcagcgccgagcgcggtggccatcatcgccgccac
gaagcgccggtcgacgatttcttcctgaagccgtacgagccgtcggcgtcggcgaagcag
ccggacgacgcgcagcccgcgcagcagcccgagaagaaagggccgaagcgccaggtcgcc
gcgctgctcggcggcttcgggatgccgcgcaagccgtcggcataa
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