Burkholderia cenocepacia J2315: BCAL2949
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Entry
BCAL2949 CDS
T00771
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcj03032
]
BCAL2949 (ihfB)
03036 Chromosome and associated proteins [BR:
bcj03036
]
BCAL2949 (ihfB)
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAL2949 (ihfB)
DNA replication proteins [BR:
bcj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BCAL2949 (ihfB)
Chromosome and associated proteins [BR:
bcj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BCAL2949 (ihfB)
DNA repair and recombination proteins [BR:
bcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BCAL2949 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CAR53251
UniProt:
B4EB39
LinkDB
All DBs
Position
1:complement(3227426..3227749)
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gacgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctggcgaaaggg
catcgcattgaaattcggggtttcggcagctttggcctcaatcgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aagcctggcaaggaattgcgtgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgagcgttga
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