Burkholderia cenocepacia J2315: BCAL3005
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Entry
BCAL3005 CDS
T00771
Name
(GenBank) possible DNA polymerase/helicase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj03030
DNA replication
bcj03430
Mismatch repair
bcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAL3005
03430 Mismatch repair
BCAL3005
03440 Homologous recombination
BCAL3005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcj03032
]
BCAL3005
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAL3005
Enzymes [BR:
bcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCAL3005
DNA replication proteins [BR:
bcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCAL3005
DNA repair and recombination proteins [BR:
bcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCAL3005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAR53327
UniProt:
B4EBN9
LinkDB
All DBs
Position
1:complement(3295839..3296966)
Genome browser
AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSSADHRITEIGVVEIGPLGVSTWTSLVNPGQAIPP
FIQQLTGISDAMVRDAPTFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGLTFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRQLHEIVPLER
LRDQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGERDEALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIARLRPSYNRRPTADATRAGGAPW
PFEGAVAFEANGERRLFHVIDGWCYLGSAESLDAAARLVADAAASVFEPFTHRLLQTHLA
RGLQVIPLMALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgtccgtccgatcccgccagcgaacagccgctcgtcttcgtcgacctc
gaaaccaccggcggctcgtccgccgaccaccgcatcaccgaaatcggcgtggtcgaaatc
ggaccgctcggcgtgtcgacgtggacgagtctcgtcaatccggggcaggcgatcccgccg
ttcatccagcaactgacgggcatctccgacgcgatggtgcgcgacgcgccgacgttcgcg
tcgctcgcgccggcgttgttcgagcggctcgacgggaagctgttcgtcgcgcacaacgcg
agcttcgaccgcggtttcctgcgcgccgagttcgagcgcgccgggctgaccttcaatccc
gatgtgctctgcacggtgcggctgtcgcgcgcgctgtttccgcgcgaatcgcggcacggg
ctcgatgcgctgatcgaacggcatgggctcgttccggccgcgcgccaccgggcgctggcc
gatgccgacctgctctggcagttctggcgccagttgcacgagatcgtgccgctcgagcgg
ctgcgcgaccagatcgcgcggacgacgcgtcacttccgtctgggcggcgatctgaccgag
gcgtggctggataccgcgccggcagggtgcggcgcgtatgcgttgttcggggagcgtgac
gaagcgctgtatgtcggccgcagcgtgcgcgtgcggcagcggctgcgcgcgctgttgacc
ggcgaacgccggtcgtcgaaggaaatgcggctggcgcagcaggtgcgccgtgtcgaatgg
cgcgagaccggcaatgagctgggggcgatgctcgccgaagcgcaatggattgcccggttg
cgcccgtcgtacaaccggcgccccacggccgacgctacccgcgcgggtggcgcgccctgg
ccgttcgaaggcgccgtcgcgttcgaggcgaacggcgagcgccgcctgtttcatgtgatc
gacggctggtgctatctcggttcggcggaatcgctcgatgcggccgcgcggctcgtggcc
gacgcggcggccagtgtgttcgaacccttcacccatcgcctgctgcagacgcatctcgcg
cgcggcctgcaggtgattccgctcatggcgctcacgccggcggattga
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