Burkholderia cenocepacia J2315: BCAL3197
Help
Entry
BCAL3197 CDS
T00771
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj00260
Glycine, serine and threonine metabolism
bcj00460
Cyanoamino acid metabolism
bcj00630
Glyoxylate and dicarboxylate metabolism
bcj00670
One carbon pool by folate
bcj00680
Methane metabolism
bcj01100
Metabolic pathways
bcj01110
Biosynthesis of secondary metabolites
bcj01120
Microbial metabolism in diverse environments
bcj01200
Carbon metabolism
bcj01230
Biosynthesis of amino acids
bcj01240
Biosynthesis of cofactors
bcj04981
Folate transport and metabolism
Module
bcj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BCAL3197 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BCAL3197 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BCAL3197 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BCAL3197 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BCAL3197 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BCAL3197 (glyA)
Enzymes [BR:
bcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BCAL3197 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CAR53521
UniProt:
B4ECY9
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(3493575..3494822)
Genome browser
AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLANEHKPKLIVAGASAFAL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKEYQQKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgcgaacgtcgatcccgaaatctttgcagcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcgcagggctcgcagctcacgaacaagtacgcggaagggtat
ccgggcaagcgctactacggcggttgcgagtacgtggacgtggtcgagcagctggcgatc
gaccgcgtgaagcagctgttcggcgcggaagcggcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggtgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgactacgacgcggccgag
aagctggcgaacgaacacaagccgaagctgatcgtcgcgggcgcatcggcattcgcgctg
aagatcgatttcgagcgtctggcgaagatcgcgaagtcggtcggcgcatacctgatggtc
gacatggcgcactacgcaggcctgatcgcggcgggcgtgtacccgaacccggtgccgcac
gcggatttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggcggaatacgagaagccgatcaactcggcgatcttcccggggatccagggc
ggcccgctgatgcacgtgatcgcggcgaaggcggtggcgttcaaggaagcgctgtcgccg
gagttcaaggaatatcagcagaaggtggtcgagaacgcacgcgtgctggccgaaacgctg
gtcaagcgcgggctgcggatcgtgtcgggccgtacggaaagccacgtgatgctggtggac
ctgcgcgcgaagcacatcacgggcaaggcggcggaagcggcgctcggcgcggcgcacatc
acggtgaacaagaacgcgattccgaacgacccggaaaagccgttcgtgacgagcggcatc
cgtctcggctcgccggcgatgacgacgcgcggcttcgggccggcggaagccgagcaggtc
ggcaacctgatcgccgacgtgctggagaacccggaagacgcagcgacgatcgagcgcgtg
cgcgcgcaggtcgccgagctgaccaagcgtttcccggtctatcgctga
DBGET
integrated database retrieval system