Burkholderia cenocepacia J2315: BCAM0240
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Entry
BCAM0240 CDS
T00771
Symbol
cciR
Name
(GenBank) N-acylhomoserine lactone dependent regulatory protein
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCAM0240 (cciR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcj03000
]
BCAM0240 (cciR)
Transcription factors [BR:
bcj03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BCAM0240 (cciR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
HTH_28
GAF_2
HTH_30
HTH_38
HTH_10
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CAR54100
UniProt:
B4EI53
LinkDB
All DBs
Position
2:complement(297531..298319)
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AA seq
262 aa
AA seq
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MDRVCQRGAGDTPTVPQPLTSSLAGRWAPLATAFLNTVDLSSLLKLFGDVSASLGFPRFA
ISRVSRRHTGNGRAMAVETLCARYPDHWVAHYAQRDYGPVDPVHRMAFARATPYRWADIR
GLNRIEQRVLGEARDAGLTSGVSIPLRETNGDILLVNLASPSPEIKTEVHMRLASSIGAL
FHQELHRLMKPHRPEPALELSPRQQECLAWVARGKSSWAIASIVGISPHTVDYHIAEAMK
ILGINSRTAAAVHAVTTGLIHV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgagtctgtcaacgcggcgcgggtgacacacccaccgtaccgcagcctttaaca
tcaagcctggccggccgatgggcaccgctggccaccgcctttctcaataccgtggacctg
tcgtctttgctgaagttgttcggtgacgtgtccgcttcgttgggcttcccacgctttgcc
atcagccgagtctctcgaagacacacgggaaacggccgcgcgatggcagtcgagacgctt
tgcgcacgctatccggatcattgggtcgcccattacgcgcaacgagactacggtccggtc
gatccggtccatcggatggcgtttgcccgtgccaccccctatcgatgggccgacatcaga
ggcttgaatcgcatcgagcaacgcgtgctcggtgaggcacgcgacgcgggattaaccagt
ggcgtgagtatcccgcttcgcgagaccaacggcgacatcctgctggtgaatctcgccagt
ccgtcgccggagatcaagacagaagtccacatgcggctcgcgagctcaattggcgcgctc
tttcatcaagagctccatcgattgatgaagccccatcggcctgagccggcgcttgaactc
tccccgcgccaacaagagtgcctcgcgtgggttgcccggggtaaatcgtcatgggcgatc
gcctccattgttggcatatcgccccataccgttgactaccacatcgccgaagcgatgaag
attttaggcatcaacagtcgaaccgcggcagctgtgcatgccgtcacaaccggcttgatc
cacgtgtaa
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