Burkholderia cenocepacia J2315: BCAM0580
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Entry
BCAM0580 CDS
T00771
Name
(GenBank) putative cyclic-di-GMP signaling protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCAM0580
Enzymes [BR:
bcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BCAM0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CAR54438
UniProt:
B4EKM4
LinkDB
All DBs
Position
2:643913..645916
Genome browser
AA seq
667 aa
AA seq
DB search
MDDENDSAVLEAHVGTRSPCWRLGSDSNALELAAVRGLTNVAIALTVEQAARIRALTGVT
SHLVLDILLFGNPVSLHLVGRKVNTVDWAGTASAYSDTESVAGDLSHGLAFAEQVVSEVN
SLVVILDRNGMVQRFNRLCEEVTGKREVDVIGRSAFELFMSPEQGAQSRSNITGFFASNQ
SFAVERYINTVNGPRLFQFRNKFVQSGSGVDEQYLICSGIDITEERNAQQRLTELANTDV
LTGLPNRHAISERIHAAIAAESEQTRGQVGILFLDLDNFKRVNDHYGHITGDRLLQDVSA
IISGCLPSGATLARLGGDEFLVLFEQGTRPLLEATAQIILERLRTPIHLGLMEVYTSCSI
GIAMHPQHGDSLETLIRSADTAMYVAKEEGKHTYRVFSLEMNQKVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVHGVEALIRWQSPDRGLVAPVEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAKGLGIRIAVNVSARQLQDMNIVHQFASILDGAGLKPGLLDIELTESCFI
EDEDAAIGLMRQFRQLGAEIHLDDFGTGYSSLSQLSRLPLDAIKLDRTFITAIDRNPRSQ
ALVRSVVSLAKALNFAVVAEGVETHAEAEFLKQLDVDHAQGYYYARPMPAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagcgcggtgctcgaggcgcacgtcggtacgcgcagcccctgc
tggcgtctcggcagcgacagcaacgcgctcgaactggccgcggtccgcggcctgaccaac
gtcgcgatcgcgctgacggtcgagcaggccgcgcgcatccgcgcgctgaccggcgtcacg
tcgcacctcgtgctcgacatcttgctgtttggcaacccggtcagcctccatctcgtcggc
aggaaggtcaatacggtcgactgggccggcacggcgtccgcctattccgataccgaatcc
gtcgccggcgacctgtcgcacgggctcgcgttcgccgagcaggtcgtgtccgaagtgaat
tcgctcgtcgtgatcctcgaccgcaacgggatggtgcagcgcttcaaccgcctgtgcgag
gaagtgacgggcaagcgcgaggtcgacgtgatcggccgcagcgcgttcgagctgttcatg
agccccgagcagggcgcgcagtcgcgcagcaacatcacgggctttttcgcgagcaaccag
tcgttcgcggtcgagcgctacatcaacacggtcaacgggccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggcgtcgacgagcagtacctgatctgctcgggcatc
gacatcaccgaggagcgcaacgcgcagcagcggctcaccgagctcgcgaacaccgacgtg
ctcaccgggctgccgaaccgccatgcgatcagcgagcgcatccacgcggcgatcgccgcg
gagagcgagcagacgcgcgggcaggtcggcatcctgttcctcgatctcgacaacttcaag
cgcgtcaacgatcactacgggcacatcaccggcgaccgcctgctgcaggacgtgtcggcg
atcatcagcggctgcctgccgtccggcgcgacgctcgcgcggctcggcggcgacgaattc
ctcgtgctgttcgaacagggcacgcgcccgctgctcgaagcgaccgcgcagatcatcctc
gagcggctgcgcacgccgatccatctcgggctgatggaggtctacacgagctgctcgatc
ggcatcgcgatgcatccgcagcacggcgattcgctcgagacgctgatccgcagcgccgat
accgcgatgtacgtcgcgaaggaagagggcaagcatacgtatcgcgtgttctcgctggag
atgaaccagaaggtcgcgaagtacatgtggctcgacacgaacctgcgcaaggcgctcgag
gaagagcagttcgtgctgcattaccagccggtcgtcgatatcgcgacgggcgacgtgcac
ggcgtcgaggcgctgatccgctggcagtcgcccgatcgcgggctcgtcgcgccggtcgag
ttcatccgtttcgcggaagagtcggggctgatcgcgccgctcggacgctgggtgatgcgc
acggcagccgcgcaggccgccgcgtggaaggcgaaggggctcggcatccggatcgcggtg
aacgtgtccgcgcggcagttgcaggacatgaacatcgtgcatcagttcgcgtcgattctc
gacggcgcggggctcaagcccggcctgctcgacatcgagctgaccgagagctgcttcatc
gaggacgaggacgcggccatcgggctgatgcggcagttccgccagctcggcgcggagatc
catctcgacgatttcggcaccggctattcgtcgctgtcgcagttgtcgcggctgccgctc
gacgcgatcaagctcgaccgcaccttcatcacggcgatcgaccgcaatccgcgctcgcag
gcgctggtgcgctcggtcgtgtcgctcgcgaaggcgctgaatttcgcggtggtcgccgaa
ggcgtcgaaacgcatgcggaagccgaattcctcaagcagctcgacgtcgatcacgcgcag
ggctactactacgcgcggccgatgccggcgcaggcgttcgaggcgtggctcgcggagacg
agaaagctcaggctgatcgcctga
DBGET
integrated database retrieval system
