Burkholderia cenocepacia J2315: BCAM1259
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Entry
BCAM1259 CDS
T00771
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BCAM1259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcj03021
]
BCAM1259
Transcription machinery [BR:
bcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCAM1259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
KORA
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
CAR55114
UniProt:
B4EHD8
LinkDB
All DBs
Position
2:complement(1382085..1383611)
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AA seq
508 aa
AA seq
DB search
MTTPRPTPRADTPLDPIIQLLALAGEQGYLTHADLVDALPPESDSPDALDVVRAALADIG
IAVLDEPAVPAPFAGAAPVEVDRDALDEGRAMLGDLARGTSASTDPLALYMRRMHAVPLL
TREGEIVLAREIETGRHQVLHAIAGYPPAVDALLERHRATGTTGSPDDDDADAPVPARYD
TLQAAASALREAVHAHGTRSAEYRDARNHVAALLGSLAWVAPAVDDASRVVRALAAAPHD
PSAGDAACFDAVARRALAAALSDGQQKVRDATRAMLEANLRLVLSIARKYLNRGVDLSDL
VQDGCLGLMRAIEKFEYRRGFKFSTYATWWIRQAIARAVADRSRTIRVPVHVGDQYQRVQ
RHALRFRQRTGRRATPAELAAETGLAEDKLRAVLALPAEPVSLDTPLPDADTGLVELIED
QASASPFEQLADTRMRDCVRSLLRSVTPTEADVLRRRFGLGGAEPDTYDAIAQDAGMSRE
RVRQIEKRALAALRTAAEAENAQSFLDA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactacgccacgccccactccccgggcggacacaccgctcgatccgatcatccagctg
ctggcgctcgccggcgagcagggttatctgacgcacgccgacctcgtcgacgcgctgccg
cccgaaagcgacagccccgacgcgctcgatgtcgtgcgcgccgcgctggccgacatcggc
atcgcggtactcgacgagccggccgtgcccgcgccgttcgccggcgcggcgccggtcgag
gtcgaccgcgacgcgctcgacgaaggccgggccatgctcggcgacctcgcgcgcggcacg
agcgcgtcgaccgatccgctcgcgctctacatgcggcgcatgcacgcggtgccgctgctc
acgcgcgaaggcgaaatcgtgctcgcccgcgagatcgagacgggccgccatcaggtgctg
cacgcgatcgccggctatccgcccgcggtcgacgcgctgctcgagcgtcatcgcgcgacg
ggcacgaccggctcgcccgatgacgacgacgccgacgcgcccgtgcccgcccgctacgac
acgctgcaggcagcggcgtcggcgctgcgcgaggcagtgcatgcgcatggcacccgttcg
gccgaataccgcgacgcacgcaaccacgtggccgcgctgctcggttcgctcgcgtgggtc
gcgccggccgtcgacgacgcgagccgtgtcgtgcgcgcgctcgcggccgccccgcatgat
ccgtcggcaggcgacgcggcgtgcttcgacgcggttgcacggcgcgcgcttgctgccgcg
ctgagcgacggccagcagaaggtgcgcgacgcgacgcgggcgatgctcgaggcgaacctg
cggctcgtgctgtcgatcgcgcgcaagtacctgaaccgcggcgtcgacctgtccgacctc
gtgcaggacggctgcctcggcctgatgcgcgcgatcgagaaattcgaataccggcgcggg
ttcaagttctcgacctatgcgacctggtggattcgccaggcgatcgcgcgcgcggtcgcg
gatcgctcgcgtacgatccgcgtgccggtgcacgtcggcgaccagtaccagcgcgtgcag
cggcatgcgctgcgctttcggcagcgcacgggccgccgcgccacgccggccgagctcgcg
gccgaaaccggcctcgccgaagacaagctgcgcgcggtgctcgcgctgcccgccgagccg
gtctcgctcgacacgccgctgccggacgcggacactggcctcgtggaactgatcgaggac
caggcatcggccagcccgttcgagcaactggccgacacgcgcatgcgcgactgcgtgcgg
tcgctgctgcggtcggtcacgccgaccgaggccgacgtgctgcgccggcggttcggcctc
ggcggcgccgagcccgacacctacgacgcgatcgcgcaggatgcggggatgtcgcgcgag
cgcgtgcgacagatcgagaaacgggcgctcgccgcgctgcgcacggccgccgaggccgag
aacgcgcagtcgtttctcgacgcgtaa
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