KEGG   Burkholderia cenocepacia J2315: BCAM1307
Entry
BCAM1307          CDS       T00771                                 
Name
(GenBank) putative helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bcj  Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:bcj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcj03400]
    BCAM1307
Enzymes [BR:bcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BCAM1307
    5.6.2.6  RNA 3'-5' helicase
     BCAM1307
DNA repair and recombination proteins [BR:bcj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BCAM1307
SSDB
Motif
Pfam: DEAD_assoc WHD_4th_Lhr WHD_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII WHD_DprA HTH_IclR MarR HTH_Crp_2 TrmB LexA_DNA_bind
Other DBs
NCBI-ProteinID: CAR55163
UniProt: B4EHU7
LinkDB
Position
2:complement(1436652..1441163)
AA seq 1503 aa
MRPRARIPLAPYFNAPMDVTATRPAARALDVFHPAVAAWFTRTFAAPTGAQALAWPHIKA
GRSTLVAAPTGSGKTLTAFLCALDDLVRDALAHDGTLPDATLVVYVSPLKALSNDIHVNL
DAPLAGIAESLAQLGLPVPAIRTAVRTGDTTQAERAALRKRAPHILVTTPESLYVLLSST
SGRQMLSNVRSVIVDEIHALASSKRGSHLALSLERLDALTGRALPRIGLSATQKPIDAVA
RFLVGGPADAPRDCAIVDTGHTRERDLALELPNVPLEPVMATDVWEQVYDRIAGLAAAHR
TTLVFVNTRRTAERMARHLADRLGKDAIAAHHGSLAKEHRFDAEQRLKRGELKLLVATAS
LELGIDIGDVDLVCQVGSPRGIAPFLQRVGRSGHHVGGVPKGRLFPLSRDELVECAALLD
CVQRGELDALRIPEAPLDVLAQQIVAEVACTEWQEDALYASFTRAAPYARLTRERFDEVM
KMLAEGFTSRRGVRGAYLHRDVVGGTVRGRRNAMMTATTSGGTIPDMADYAVLLEPQGIQ
VGTVNEDFAIESLAGDVFQLGNQSYRIIRVETGRVRVEDAQGQSPSIPFWLGEGLGRSDE
LSAAVGRLRARLDALFAEGDRQVDSGGRKRGGGNAVSNAATEADAPAATGTALAPADSRL
APALRWLVDDLHLSPDAARQIADYLARTRAALGALPTQDTLVMERFFDESGGTQLVIHSP
FGSRINRAWGLALRKRFCRNFNFELQAAATDDAIILSLSLAHSFALDEVWRYLRSASAEH
VLIQALLDAPMFGVRWRWNATTALALPRFTGGRRTAPQLQRMKSDDLLATVFPDQVACLE
NIVGEREIPHHPLVDQTLDDCLHDAMDTDGWLALLRRIESGAIELIARDLPAPSPLAAEI
LNAKPYAFLDDAPLEERRTQAVQSRRWSDPESADDLGALDVDAIDAVRDEAWPLVRDADE
MHDALLTLACVADSETHAHAGWPERLAELAERRRATKLATPGGAALWVPVERLVCLRALH
PDARMTPALKVPAACAQPWEADAALVDVIRARLTGFGPLTLDAIAAPLGLPPASIATALA
ALEREGYVMRGRFTPGAATDEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLFHWQH
LTPDTRGTGRDALAAVVEQLEGYEAAASAWEDALLPARLTDYTAGGLDELCRSGKLVWTR
IGAPARAAGTPVKTTPIVLLPRRHLSAWHALRDPDAQPALSARATQVRDALAAHGAMFFD
ALLDELHMLPVELEQALGELVSAGLVNADSYAGLRALLKPAVKRSATYAPRTRRGGALIG
GMDDAGRWALVQRQAPSDDDAPAPKRGLATTDSDALEHIVWTLLRRYGVVFWRLLEREAD
WLPSWRELVRVLQRLEARGEIRGGRFVAGLAGEQFALPEAIPILRELRRQPGDGQYVCVT
GADPLNLAGTLLPGDKVPALAGNRVLFRDGVPVASLVSGTFHYAADLSPAAREDARLRLA
RSC
NT seq 4512 nt   +upstreamnt  +downstreamnt
atgcgtccgcgcgctcgcatcccgctcgcaccctatttcaacgctccgatggacgtcaca
gctacccgccctgccgcccgtgcgctcgacgtgttccacccggccgtcgccgcgtggttc
acgcgcacgtttgccgcgccgaccggcgcgcaggcactcgcgtggccgcacatcaaggcc
ggccgctcgacgctcgtcgccgcgccgaccggctccggcaagacgctcaccgcgttcctg
tgcgcgctcgacgatctggtgcgcgatgcgctcgcgcacgacggcacgctgcccgacgcg
acgctggtcgtctacgtgtcgccgctgaaggcgctgtcgaacgacatccacgtgaacctc
gacgcgccgctcgccggcatcgccgaatcgctcgcgcaactcggcctgccggtgccggcg
atccgcaccgcggtgcgcaccggcgacacgacgcaggccgaacgcgccgcgctgcgcaag
cgcgcgccgcatatcctcgtcacgactcccgaatcgctgtacgtgctgctgtcgtccacg
tcgggtcgccagatgctgtcgaacgtgcgctcggtcatcgtcgacgaaatccatgcgctg
gcgtcgtccaagcgcggcagccatctcgcgctgtcgctcgaacgcctcgacgcattgacc
gggcgcgcgctgccgcgcatcgggctgtccgccacgcaaaagccgatcgacgcggtcgcg
cgcttcctggtcggcgggccggccgacgcgccgcgcgactgcgcgatcgtcgacaccggc
cacacacgcgagcgcgacctcgcgctggagctgccgaacgtgccgctcgaaccggtgatg
gcgaccgatgtgtgggaacaggtgtacgaccgcatcgccgggctcgcggccgcgcatcgc
acgacgctggtgttcgtcaacacgcgccgcaccgccgagcgcatggcgcgccatctcgcc
gaccggctcggcaaggacgcgatcgccgcgcatcacggcagcctggcgaaggagcaccgc
ttcgacgccgagcagcgcctgaagcgcggcgaactgaagctgctcgtcgcgaccgcgtcg
ctcgaactcggcatcgacatcggcgacgtcgatctcgtctgccaggtcggctcgccgcgc
ggcatcgcgccgttcctgcagcgcgtcggccgctcggggcaccacgtcggcggcgtgccg
aaggggcgactgtttccgctgtcgcgcgacgagctggtcgaatgcgcggcgctgctcgat
tgcgtgcagcgtggcgaactcgatgcgctgcggattcccgaagcgccgctcgacgtgctc
gcgcagcagatcgtcgccgaagtcgcgtgcacggaatggcaggaggacgcgctgtatgca
agcttcacgcgggccgcgccgtacgcccggctgacgcgcgagcgcttcgacgaagtgatg
aagatgctcgccgaggggttcacgagccgtcgcggcgtgcgcggcgcgtacctgcaccgc
gacgtggtcggcggcacggtgcgcggccgccgcaacgcgatgatgaccgccaccacgtcc
ggcggcacgatccccgacatggccgactacgcggtgctgctcgaaccgcagggtatccag
gtcggcaccgtcaacgaggatttcgcgatcgagagcctggccggcgacgtgttccagctc
ggcaaccagtcgtaccggatcattcgtgtcgaaacgggccgcgtgcgggtcgaggatgcg
caggggcaatcgccgagcattccgttctggctcggcgaggggctcgggcgcagcgacgag
ctgtcggcggcggtcggccggctgcgcgcgcggctcgacgcgctgttcgcggaaggcgac
cggcaggtcgacagcggcgggcgcaagcgtggcggcggcaacgcggtaagcaatgcggca
acggaagccgacgcaccagccgcaacgggtaccgcgctcgcccccgccgacagccgcctc
gcgcccgcgttgcgctggctcgtcgacgatctccacctgtcgcccgacgccgcgcgccag
atcgccgactacctcgcgcgcacccgcgctgcgctcggcgcgttgccgacgcaggacacg
ctcgtgatggagcgtttcttcgacgaatcgggcggcacgcagctcgtgatccattcgccg
ttcggcagccggatcaatcgcgcatgggggctcgcgctgcgcaagcgcttctgtcgcaac
ttcaacttcgaactgcaggccgccgcgaccgacgacgcgatcatcctgtcgctgtcgctc
gcgcacagcttcgcgctcgacgaagtgtggcgctacctgcgttcggccagcgccgagcac
gtgctgatccaggcgctgctcgacgcgccgatgttcggcgtgcgctggcgctggaacgcg
accaccgcgctcgcgctgccgcgtttcaccggcggccggcgcaccgcgccgcaactgcag
cggatgaaaagcgacgatctgctcgcgacggtgttccccgatcaggtcgcgtgcctcgag
aacatcgtcggcgaacgcgagattccgcatcatccgctcgtcgaccagacgctcgacgat
tgcctgcacgacgcgatggacaccgacggctggctcgcgctgctgcgccggatcgaaagc
ggcgcgatcgagctcatcgcgcgcgacttgcccgcgccgtcgccgctcgcggccgagatc
ctcaacgcgaagccctacgcgttcctcgacgacgcgccgctcgaggagcgccgcacgcag
gccgtgcagtcgcgccgctggagcgatcccgaatcggccgacgatctcggcgcgctcgac
gtcgacgcgatcgacgcggtgcgcgacgaagcgtggccgctcgtgcgcgacgccgacgaa
atgcacgatgcgctgctcaccctcgcctgcgtcgccgacagcgagacgcatgcgcacgca
ggctggcccgagcgactcgcggaactcgcggaacgccgccgcgcgacgaaactcgcgacg
ccgggcggcgccgcgctgtgggtaccggtcgaacggctcgtctgcctgcgcgcgctgcat
cccgacgcccgcatgacacccgcgctcaaggtgccggccgcatgcgcgcagccgtgggaa
gccgatgccgcactcgtcgacgtgatccgcgcgcggctcaccggcttcgggccgctcacg
ctcgatgcgatcgccgcgccgctcggcctgccgcccgcgtcgatcgcgacggcgctcgcg
gcgctggagcgcgaaggctacgtgatgcgcggtcgcttcacgccgggcgcggccacggac
gaatggtgcgaacgccacctgctcgcacgcattcatcgctatacggtgaagcggctgcgc
cgcgagatcgagccggtcgaacgcgccgatttcatgcgcttcctgttccactggcagcac
ctgacacccgacacgcgcggcaccggccgcgacgcgctggccgccgtggtcgaacagctc
gaaggctacgaggcggcggcaagcgcatgggaagacgcgctgctgcccgcacggctcacc
gactacacggcgggtggcctcgacgagctgtgccgctcgggcaagctggtgtggacccgc
atcggcgcaccggcccgcgcggccggcacgcccgtgaagacgacgccgatcgtgctgctg
ccgcgccgccatctttccgcgtggcacgcgctgcgcgaccccgatgcgcaaccggcgctg
tccgcacgcgccacgcaagtgcgcgacgcgctcgccgcgcacggcgcgatgttcttcgat
gccctgctcgacgagctacacatgctgcccgtcgagctcgaacaggcgctcggcgaactc
gtgtcggccggcctcgtgaatgcggacagctacgcgggcctgcgcgcgctgctgaagccg
gccgtcaagcgcagcgcgacctatgcgccccgcacgcgacgcggcggcgcgctgatcggc
gggatggacgatgccggccgctgggcgctcgtgcagcgtcaggcaccgtcggacgacgac
gcgcccgcgccgaaacgcggcctcgccacgaccgattccgacgcgctcgaacatatcgtg
tggacgctgctgcgccgctacggcgtcgtgttctggcggttgctcgaacgcgaagccgac
tggctgccgagctggcgcgaactcgtgcgcgtgctgcagcgcctcgaagcacgcggcgag
attcgcggcggccgcttcgtcgccgggctcgcgggcgagcagttcgcgctgcccgaggcc
attccgatcctgcgtgaactgcgacggcaaccgggcgatggacaatacgtgtgcgtgacg
ggcgccgacccgctgaatctcgccggcacgctgctgcccggcgacaaggtgccggcgctg
gccggcaatcgcgtgctgtttcgcgatggcgtgcccgtcgcgtcgctggtatcgggtacg
ttccactacgcagccgacctgtcgcccgccgcgcgcgaggacgcacggctgcggctcgcg
cgttcctgctga

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