Burkholderia cenocepacia J2315: BCAM1516A
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Entry
BCAM1516A CDS
T00771
Name
(GenBank) conserved hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BCAM1516A
09124 Replication and repair
03420 Nucleotide excision repair
BCAM1516A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcj03021
]
BCAM1516A
03036 Chromosome and associated proteins [BR:
bcj03036
]
BCAM1516A
03400 DNA repair and recombination proteins [BR:
bcj03400
]
BCAM1516A
Enzymes [BR:
bcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BCAM1516A
Transcription machinery [BR:
bcj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BCAM1516A
Chromosome and associated proteins [BR:
bcj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BCAM1516A
DNA repair and recombination proteins [BR:
bcj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BCAM1516A
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAR55370
UniProt:
B4EJK6
LinkDB
All DBs
Position
2:1680419..1682719
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSKRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCAARDLAEIDV
ALVYFDIVSERETVLTETLDAGTLATFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GQFRSGQRELAVAVYRAARDEQCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAATTLGASTSALPLRVLELVARDKACEHPDNACHGESCPLAKGFYDRLPAA
RDAAIEAGLLDRDTVRTAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGTLNRA
QAERYAAYPDVPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPMPRQPVLDGVAAAGRRRRVQSTLCVRNVIPAGFLAPRYAAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRNLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcattgccgggcacggcgcggtc
acgtcgaagcgcggcgcgcgctacgaaaccgaaatcgcgctgaccggcacgtggggcacg
ctcaccgtgcgcggccgcgcggacggctacgatccggtggcgaaccggctcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgccggccaaccatcgcgcgctgcactgggcg
caggcgaaggtctatgcgcacctgatgtgcgccgcgcgcgatctcgcggaaatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgagcgcgagaccgtgctgacggaaacgctggat
gctggcacgctcgcgacgttcttcgccgagcagtgcgcgtgcttcgtcggctgggccgaa
cgcgagacggcccatcgcgccgcgcgcgacgcggcgctgcgtgcgctcgcgtttccgcac
ggacagttccgcagcggccagcgcgaactggcggtggccgtctatcgcgcggcacgcgac
gagcagtgcctgatggcgcaagcgccgaccggcatcggcaagacgctcggcaccgtgttc
ccgctgctgaaggcatgcggcgagggcgagctcgaccacgtgtttttcctgaccgcgaaa
acacccggccgcgcgctcgcgctcgaagcggcaacgacgctcggcgccagcacgtccgcg
ctgccgctgcgcgtgctggaactcgtcgcgcgcgacaaggcgtgcgagcatccggacaac
gcgtgtcacggcgaatcgtgccccctcgcgaaaggcttctacgaccggctgccggccgcg
cgcgatgcggcgatcgaggccggactgctcgatcgcgatacggtgcgcaccgcggcgctc
gcgcacgacgtctgtccgtactacctggcgcaggaactcgcgcgctggtcggacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaagcgcacaacctgctcgatcgcgcccgc
aagatgtacagcgcgtcgctcgatccgttcgcgttcgcggccgcgcgggaagccgcgccc
gccgcgttgcgcaaggcgttcgaccggctcgcccgcgcgtggggcacgctcaatcgtgcg
caggccgagcgctatgcggcctatcccgacgtgccgggcccgatcgtgtcggccgtgcag
aacctcgtcgcggcgatcggcgaacacctgaccgacgcgccgcgcgcgaacggcgacgcg
ctgctgcgctttcacttcgaagcaatccagttcggcgtgctggccgaagcgttcgacagc
gcgtcgatcttcgacgcgacgctgcacggcgaaccgatgccgcgccagcccgtgctcgac
ggcgtcgcggcggccggccgccggcgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
atcccggccggtttcctggcgccgcgctacgccgccgcgcgcgcgaccgtgctgttctcc
ggcacgctgagcccgttccatttctaccgcgacacgctggggctgcccggcgatacgggc
tggctcgacgtcgatgggccgttccgcgccgagcaactgacggtgcgcgtggcgagccac
gtgtcgacccgctggcgcgaccgcgatcgctcgctcgaaccgatcgccgacctgatcgcc
gcgcaatatgcgacgcgccccggcaactatctcggcttcctgagcagcttcgattacctc
gggcgcgtggtcgcgctgatgcagacgcgccatccggacgtccccgtgtgggcgcaggcg
cccggcatggccgaaagcgagcgcgatgcgtttctcgcgcgcttcgacgcgggcggacgc
ggcgtcggtttcgcggtgctgggcggggcgttctcggaaggcgtcgacctggtcggcgag
cggctgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtacctgtat
ccggggctgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcacgacgag
ggcgtcgtgcatctgatcgacgaccgttaccggcgacgcgaagtgcgcaatctgctgccg
cggtggtggcggatcgggtga
DBGET
integrated database retrieval system
