Burkholderia cenocepacia J2315: BCAM2371
Help
Entry
BCAM2371 CDS
T00771
Name
(GenBank) putative RNA polymerase sigma-subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
bcj
Burkholderia cenocepacia J2315
Pathway
bcj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BCAM2371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcj03021
]
BCAM2371
Transcription machinery [BR:
bcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCAM2371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
CAR56232
UniProt:
B4EHY9
LinkDB
All DBs
Position
2:2666931..2668817
Genome browser
AA seq
628 aa
AA seq
DB search
MPSSLDAGPARERDGAPSPCRGAHADRAAHLHALIALGIDRGYVTHGEIADALPDDAADG
ADVDAAASMLRELGIDVREHAGAHTAWTLDRHFAQVTEVASPLADASTPLAADDLLAGRT
NDPIRLYLREMSATPLLERDEEIALALRLESGRAACIDALSRDPAALAAVAAIANDIRAG
KVAASVYVTGFAGDAESAASVPTTLPDDPSMTSPAPDDDAGLALDSPAWRDTVVEALERA
GAPASAMQHALHADGFASTAYRALLREAAASTGRIRFTSRAIERIRQANGERATQARTLE
KRLVDTLVATGIPLDAARHELFAPCDDVRAWLHTCSAAHPDCAATLARHAPALIDARGAL
ARLAAQSPLPLDITIALDARLSRIERAMQPARTKLFQSNLRLVVSVAKRYADRGLPFADL
IQEGNIGLMKAVDRYDHRRGFKFSTYATWWIRQAITHALADLGRTIRVPAHTVDSLNKLS
RLARIHRQRTGDVADARALSPQMRLPVDKVRELMSIVREPISADLPVSPDHDLTLCDVTI
DADAPTPEEAASAGQLRAAVAELIDSLPVREAWILRLRYGIDVDNEYSLREIGRQLNLSA
ERVRQLEVSALERIRQFRHAPALRSLLA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgccaagctcgcttgacgccgggcccgctcgcgaacgcgacggcgcgccgtcgccgtgt
cgcggcgcccacgccgaccgcgccgcgcatctgcatgcgctgatcgcgctcggcatcgat
cgcggctacgtgacgcacggcgaaatcgccgatgcgttgcccgacgacgcggccgacggc
gcggatgtggacgccgccgcgtcgatgctgcgtgagctcggcatcgacgtacgcgagcat
gccggcgcgcacaccgcatggacgctcgaccgtcatttcgcgcaagtgacggaagtcgcg
tcgccgctcgccgacgcatcgacgccgctcgcggccgacgatctgctcgcgggccggacc
aacgacccgatccggctctatctgcgggaaatgagcgcgacgccgctgctcgaacgcgac
gaagagatcgcgctcgcgcttcgtctggaaagcggccgcgcggcatgcatcgacgcgttg
agccgcgatccggcggcactcgccgccgtcgcggcgatcgcgaacgacatccgcgccggc
aaggtggcggcgtcggtttacgtgacggggtttgccggcgatgccgaatcggccgcaagt
gtgccgacgacgttacccgacgatccaagcatgacctcacccgcgcccgacgacgacgca
ggccttgccctcgacagccccgcatggcgcgatacggtcgtcgaagcactcgaacgcgcc
ggtgcaccggcatcggcgatgcagcacgcattgcacgcggacggcttcgcgtccaccgct
taccgggcgctgctgcgcgaggcggccgcgtcgaccggccgcatccgcttcacctcgcgc
gcgatcgagcgtatcaggcaagcgaacggcgagcgcgcgactcaggcgcgcacgctcgaa
aaacggctcgtcgacacgctggtcgccacgggcatcccgctcgatgccgcgcgccacgaa
ctcttcgcgccctgcgacgacgtacgcgcatggctgcacacatgcagcgccgcgcatccc
gactgcgccgccaccctagcccgccacgcgccggcgctgatcgacgcgcgcggcgcgctc
gctcgcctcgcggcgcagtctccgttgccgctcgacatcacgatcgcgctcgatgcgcgg
ctctcgcggatcgagcgcgcgatgcagcccgcgagaacgaagctgttccagagcaatctg
cggctcgtcgtgtcggtcgccaaacgctatgccgaccgcggcctgccgttcgccgatctg
atccaggaaggcaatatcggcctgatgaaggccgtcgatcgctacgatcaccggcgcggc
ttcaaattctcgacgtatgcgacgtggtggatccggcaggcgatcacgcatgcgctcgcc
gatctggggcgcacgatccgcgtgcccgcacatacggtcgattcgctcaacaagctgtca
cggctcgcgcgcatccatcggcaacggaccggcgacgtcgccgacgcacgagcgctctcc
ccgcagatgcgactgccggtcgacaaggtgcgcgagctgatgagcatcgtgcgcgagccg
atctccgccgacctgccggtttcgcccgatcacgacctcacgttgtgcgacgtcacgatc
gacgccgacgcgccgacgccggaagaagccgcgagcgccggtcagttgcgcgcggcggtt
gccgagctgatcgacagcctcccggtacgcgaagcgtggattctgcgcctgcggtacggc
atcgacgtcgacaacgagtattcgctgcgcgagatcggccggcaactgaacctgtcggcc
gaacgcgttcgtcagctcgaggtatcggcgctcgaacgcatccggcaattcaggcacgca
ccggcacttcgctcgttgctcgcctga
DBGET
integrated database retrieval system
