Burkholderia cenocepacia J2315: BCAM2704
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Entry
BCAM2704 CDS
T00771
Symbol
prpR
Name
(GenBank) putative sigma interaction-related Fis-family transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bcj
Burkholderia cenocepacia J2315
Brite
KEGG Orthology (KO) [BR:
bcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcj03000
]
BCAM2704 (prpR)
Transcription factors [BR:
bcj03000
]
Prokaryotic type
Helix-turn-helix
Other families
BCAM2704 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
PAS
AAA_2
AAA
PAS_8
AAA_3
AAA_16
AAA_7
PAS_7
nSTAND3
DUF6262
Motif
Other DBs
NCBI-ProteinID:
CAR56568
UniProt:
B4EKX3
LinkDB
All DBs
Position
2:3058590..3060512
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AA seq
640 aa
AA seq
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MGISRLRDLFREIAGEFDERADVRIVTRAYEDALGAIAEAGTARPDVIVAAGSNGGFLKT
RAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGETPPEVRRFVAAYGLDVQFASYQS
AQEAEACVHDLRDRGIETIVGPGLVTDLAASAGMGAVFLYSHASVRKAVETALEVAYATH
AEAFRRQRLDTLLQHLRDGVVALDAHGRVEAINERLASALGVEPAAAVGRALVDLRPELR
TLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPTTQQF
AARYALDDVVGASAPMTRVRELVRRYAKSDATVLVLGESGTGKEMIAQSLHALSARRSYP
FVAVNCGAFPEALLESELFGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQS
RLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAVEAGTFRADLYYRLNILNVGLPP
LRERAADIPALAATLLVQAARREPRLAERVRDTDDALRVLDATQATLARYRWPGNVRELQ
NVVERIAVELAEDVDESDPDAACAALAPGALQVIAPELFAAPPDAGGADDDDGQTLHARR
RRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLSAK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcagccgcctgcgcgacctgtttcgcgagatcgccggcgagttcgacgaacgc
gccgacgtgcgcatcgtgacgcgcgcctatgaggatgcgctcggcgcgatcgccgaggct
ggcaccgcgcggcccgacgtgatcgtcgcggccggctcgaacggcggcttcctgaaaacg
cgtgcgcaggtgccggtggtggtcgtgtcgccgaccggcttcgacgtgatgcaggcgctc
gctcgcgcgcgacgcgacgcgacgcggatcgcgctcgtcagcgccggcgaaacgccgccc
gaagtgcgtcgcttcgtcgccgcgtacggcctcgacgtgcagtttgcgtcatatcagtcc
gcgcaggaagcggaagcctgcgtgcacgacctgcgcgatcgcggcatcgagacgatcgtc
ggccccggcctcgtcaccgatctcgcggccagcgccggcatgggtgcggtgttcctctat
tcgcacgcgtcggtgcgcaaggcagtcgagacggcgctcgaagtcgcgtatgcgacgcac
gccgaggcattccgccgccagcggctcgacacgctgctgcagcatctgcgtgacggcgtg
gtcgcgctggacgcgcacggccgcgtcgaggcgatcaacgaacggctcgcgtcggcgctc
ggggtcgaacccgcggcggccgtcggccgcgcgctcgtcgacctgcggcccgaactgcgc
acgctgcgcggcgaggacggcgatgcgctcgcgaccgtgcgcggcgtgcgctacgtcgtg
catcgcgggccgctcgtcgatcgcggcgtcacgtcgggcagcgtgctgacgttccaggaa
tcgcgcgcggtcgaacggctcgatcgcgcgctgcgttcgcaaccgaccacgcagcagttc
gcggcccgctatgcgctcgacgacgtggtcggcgcctcggcgccgatgacgcgcgtacgc
gagctcgtgcgccgctatgcgaaatccgacgcgaccgtgctcgtgctcggcgaaagcggc
accggcaaggaaatgattgcgcagagcctgcatgcgctgtccgcgcggcgcagctatccg
ttcgtcgcggtcaactgcggcgcgtttccggaagcgctgctcgagagcgaactgttcggc
tatgaggaaggcgcattcaccggcgcgcgacgcggcggcaagaccggcctgttcgaggcc
gcgcatcgcggcacgctgtttctcgacgaaatcggcgagatgccgccgtcgctgcagagc
cggctgctgcgcgtgctgcaggagcgcgaggtgatccgcctcggctcgaccgagccgatc
cgcatcgacgtgcgcgtgatcgctgcgacgcaccggccgctgctcgcggccgtcgaggcc
ggcacgttccgcgcggatctctattaccggctcaacatcctgaacgtcggcctgccgccg
ctgcgcgaacgcgcggccgacattcccgcgctcgcggcgacgctgctcgtgcaggccgcg
cggcgcgagccgcgtctcgccgaacgcgtgcgcgacaccgacgacgcgctgcgcgtgctc
gacgcgacgcaagcgacgctcgcgcgctaccgctggccgggcaacgtgcgcgagttgcag
aacgtggtcgagcggatcgcggtggagctggccgaggacgtcgacgagagcgatccggac
gccgcgtgtgcggcgctcgcccccggcgcgctgcaggtgatcgcgcccgagctgttcgcc
gcgccgcccgatgcaggcggcgccgacgacgacgatggacaaacgctccacgcacgccgc
cgtcgcgcggaagccgacgagatccgcgcggtactcgatgcgtgcggcggcgaccgcgat
cgcgcctgcgcgatgctcggcatcagcaagacgacgctgtggcgcaagctgtcggcgaaa
tag
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integrated database retrieval system
