Heyndrickxia coagulans 2-6: BCO26_0144
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Entry
BCO26_0144 CDS
T01527
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCO26_0144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bck03021
]
BCO26_0144
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_0144
Enzymes [BR:
bck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCO26_0144
Transcription machinery [BR:
bck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCO26_0144
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCO26_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
PASTA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AEH52203
LinkDB
All DBs
Position
142938..143699
Genome browser
AA seq
253 aa
AA seq
DB search
MHEFSTVEGVVEDVTSIILNLKKLALKIYSDEEKTLEIDVQGEGAVTAADITHDSDVEIL
NPDLYIATVAENGHLRMRMTANQGRGYVPADQNKREDHPIGVIPIDSIYTPVQRVSYQVE
NTRVGQVSNYDKLSLDVTTDGSIGPKEAIALGAKILTEHLNIFVGLTDEAQNAEIMVEKE
EDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVKA
KLEDLGLGLRKDD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaattctcgacagtcgaaggcgttgttgaagatgtgaccagcattattttgaac
ctcaaaaagctggctttgaaaatctactccgatgaggaaaaaacgcttgagattgatgta
cagggagaaggcgctgtgacagcagccgatattacgcatgacagcgatgtggagatttta
aatccggatctctatattgcgacggttgccgaaaacgggcatttgcgtatgcgcatgact
gccaaccaaggccgcggctatgttcctgctgatcaaaataagcgggaagaccatccaatt
ggtgtcattccaatagattctatttataccccggttcaacgcgtgagctaccaggtcgaa
aatacccgggtagggcaagtcagcaattatgataagctctcactggatgtcacgactgac
ggcagcatcggcccgaaagaagcaattgctttaggcgccaaaattttaaccgagcatttg
aacatcttcgtcggactgacggatgaagcacaaaatgcggaaattatggtggaaaaagaa
gaagaccagaaagaaaaagtgcttgaaatgacaattgaggaacttgatctttcagtccgt
tcttataactgcctgaaacgtgccggcatcaataccgttcaggaactggccaacaaaacg
gaagaagatatgatgaaagtccggaatcttggccgcaagtcccttgaagaagtcaaagca
aagctcgaagatttgggcttgggtttgcgcaaagacgactga
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integrated database retrieval system
