Heyndrickxia coagulans 2-6: BCO26_0295
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Entry
BCO26_0295 CDS
T01527
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03420
Nucleotide excision repair
bck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCO26_0295
03430 Mismatch repair
BCO26_0295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_0295
Enzymes [BR:
bck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCO26_0295
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCO26_0295
MMR (mismatch excision repair)
Other MMR factors
BCO26_0295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
SLFN-g3_helicase
Viral_helicase1
PhoH
DEAD
AAA_16
AAA_30
nSTAND1
NACHT
AAA_11
NPHP3_N
ResIII
DUF3463
Motif
Other DBs
NCBI-ProteinID:
AEH52354
LinkDB
All DBs
Position
315815..318106
Genome browser
AA seq
763 aa
AA seq
DB search
MPHDEEWLKEQKRVDYTIEKMKQEKETLLSKVRAVRGEAQEIRNTFWEDVTVNLDEPDDV
VETSASVRQQAELLAERERSYGHMEKDVKKLDRLIYSPYFARVDFHEEGEPSEPIYIGIA
SYRDEDEYLVYDWRAPISSIYYDGVPGPVSYQAPDGRREGIMDLKRQFLIRRGHIEAMFD
TGISIGDEMLQEMLGANANTHMKNIVATIQKEQNRIIRDVSSNLLFVQGAAGSGKTSVAL
QRIAYLLYRYRDSLHSEQIVLFSPNQLFNHYVSKVLPELGENNMQQTTFLEFAQARAGKK
LKVESLLEQMEEALEGKAENRKEAQIKGSLAFFHAVRDYAEKLLNGGIIFRDIRFKGETI
VPKEKIAEMFYAYDKSYSLPNRFQLVSKKLLKELQHIAKEERKKPWVEEEMELLGTEAYL
AAHQYAERKSRKNNDAFSGADDEKEFLARKIVNRRFSSIRKQIKAFHYFHIRAQYLDFLR
RAPEFVPGAGERLDAKTRAAFREGWLPYEDTVPFLYLFDLLTGKATSSSIKYVFIDEIQD
YSPIQLAYLRYLFPYSKFTMLGDLNQSIFGTSGRSQMELIKEIFGEEKAQVVYLTKSYRS
TAQITRFTKEILAGGEKIEWFEREGDLPVVTVARGKEEALAKVVRFAKKYAKESNTVAII
GKSRKQCAEAYETLREELDLTFIEKEYSDLPEGIILIPSYLAKGLEFDSVIVLDASASVY
KDEAERTLLYTVGTRAMHHLALISNGPVTPLLDKVPETLYVKE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccacatgatgaagaatggttaaaggaacaaaaacgcgttgattatacaattgaaaaa
atgaagcaggaaaaagaaacactgctttccaaagtaagggctgtccgcggcgaggcacag
gaaatccgcaatacgttctgggaagacgtaacggtgaacctcgatgagccggatgatgtc
gtggaaacatcggcgagcgtccgccagcaggcagaactgcttgctgaacgcgaacggagc
tacgggcatatggaaaaagacgtgaaaaaactggaccgcctcatttattcgccgtatttt
gcccgcgtcgattttcatgaagaaggggaaccttccgagcccatctacatcggtattgct
tcctaccgggatgaggatgagtatctcgtgtacgattggcgtgcgccgatttccagtatt
tactatgacggggtgcccggcccggtttcgtaccaggcgccggacggcaggcgcgaaggc
atcatggatttgaaacggcagtttttaatccggcgcggccatattgaagcaatgtttgat
accgggatctcgatcggcgatgaaatgctgcaggaaatgcttggggcaaacgcaaacacc
catatgaaaaatattgtggcgacgattcagaaagagcagaaccggattatccgtgatgtt
tcaagcaatcttctgttcgtgcaaggggccgccggaagcggaaaaacatcggttgccctg
cagcggattgcgtatttgctgtaccggtaccgcgattcgctccattccgagcaaattgtt
ttattttcgccgaaccagctgtttaatcattatgtgtcaaaagtgctcccggagctcggg
gaaaacaatatgcagcagacgactttcctggaatttgcccaggcacgcgctggcaaaaag
ctaaaagtcgaaagcctgctcgagcaaatggaagaagcgctcgaaggcaaagccgaaaac
aggaaagaagcacaaatcaaaggcagccttgcatttttccatgccgttcgggattatgcg
gaaaaacttttaaacggcggcatcattttccgcgatatccgttttaaaggcgagacgatc
gtgccgaaggaaaaaattgctgagatgttttatgcttatgataaaagttactcgctgccg
aaccggtttcagcttgtcagcaaaaagctgctgaaagaactgcaacacattgcaaaagaa
gagcggaaaaagccttgggtcgaagaagaaatggaactgctcgggacggaagcctatctt
gccgcccatcaatatgccgagcgcaaatcgcgcaagaacaatgatgcgttcagcggggcc
gatgatgaaaaagaatttttagcgcgtaaaatcgtcaaccggcgcttcagctcgatccgg
aaacaaatcaaagcatttcattatttccatatccgtgcccagtatctggactttttgcgg
cgcgcgccggagtttgtgcctggcgcgggagaacggcttgatgcaaaaacgcgcgccgct
ttccgcgaaggctggctgccctatgaagatacggtgccgtttttgtatctctttgacctt
ttgacaggcaaagcaacgagcagttcgatcaaatatgtgtttattgatgaaatccaggat
tattcgccgatccagcttgcctatttgcgctatttgttcccgtacagcaagtttacgatg
cttggtgacttgaaccagtccatattcggcacaagcggccgttcgcagatggagctgatc
aaggagattttcggcgaagaaaaagcgcaggtcgtatacttgacgaaaagctaccgttcg
actgcccagatcacccgctttacgaaagaaattttagcgggcggggagaagattgaatgg
tttgaacgtgaaggcgatttgccggttgttacggtggcccgcggcaaggaagaagctttg
gcaaaagtagtacggtttgcgaaaaaatacgcaaaagagagcaataccgttgcgatcatc
ggcaagtcacggaagcagtgtgccgaagcgtatgaaacattgcgggaagaactggatctg
acctttattgaaaaagaatacagcgatcttccggaaggcatcatcctgatcccgtcttat
cttgcgaaagggctggaatttgacagcgtcatcgtgctcgatgcttcggcgtctgtgtat
aaagatgaagcagaacgcaccctgctatacaccgtcggaacgcgggcaatgcatcacctt
gctcttatcagcaacggtccggttacaccgcttttagataaagtgcctgagacgctatat
gtaaaggaataa
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