Heyndrickxia coagulans 2-6: BCO26_0797
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Entry
BCO26_0797 CDS
T01527
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bck
Heyndrickxia coagulans 2-6
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bck03400
]
BCO26_0797
Enzymes [BR:
bck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCO26_0797
DNA repair and recombination proteins [BR:
bck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BCO26_0797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
FAM193_C
Motif
Other DBs
NCBI-ProteinID:
AEH52856
LinkDB
All DBs
Position
862354..865731
Genome browser
AA seq
1125 aa
AA seq
DB search
MTFLSETRLAHEPELGGMIRAQVYSFTRLAWKILQEVGGISRTHVSSSGLNMLIRKILED
QKEELSVFTRAADKTGFIDNVERILTEFKRFCVSPAQLQEKRASIREADGGRVLSDKLHD
LERVYQAYEQKLEGKYIDSEDYLRLLASAVEKSRYLDDAEIYIDGFHTFNPQEYLVIGEL
LKKCRRVTVALTTDRAFRGRQPDDLYLFRMPGEAYAHIYELARAFQIETEEDVALYEPAR
FRHESLRFLQSRFEELPFPTFLGESSIEIWQANNRRAEIEGVARSIREAVMEGSCRYRDI
AILVRNGEAYQDLIETVFYDYDVPYFIDRKRPMLNHPLIELIRSTLEIIRGNWRYEPVFR
AIKTELLFPPGDARTLREKMDRLENYCLAYGIQGERWTSRKRWEYRRIRGLELENLPQTD
EERKIEQELNELRLLVTAPILRLSRRLKRARTGKALCEALYLYLEELEIPEKLEALRLEK
EEAGDLVAAREHDQAWDEVMGVLDQYVEILGDEPADVGKFSAIMETGLESLKFSIVPPAL
DQVLVANLEQSRLSDVKLAFIIGVNDGVMPAKISEDGVLNDEEREYLRLTGLEIMPGSKR
RLLDEEFIFYRALTTPSEKLVLSFPLADEEGKALLPSPFINRIEDMFPARGGGLWVNDPA
ELEEKQQAAYISHPAAAIAFVTSQLQLKKRGYPMAGFWWDTYNFYMENPEWKNRAAHAFS
SLFYQNKARKLSEKTSRELYGDHILASVSRMEQFFTCPFSHFSTYGLRLRERDVFRLDAP
NIGDLFHGALKWISDTLQREGIPWSEMTKQQSMELAKAAVDDLAPKLQHQILLSSKRYQY
IKRKLEQVVGRASYILSVHAKRSGFEPVAMELAFGPKKELPPLSFTLKNGAKMELQGRID
RVDKAESENGVYVRIIDYKSSAHKLDLTNVYYGLDLQMLTYLDLIMTYSKQLTGEETIPA
GVLYFHLHDPLISAEKMLTAEEIEEEILKDFRMRGLLLDSPEVITLMDQSLESGNSAIVS
AGLKKDGQLTARSEVASKEDFEAIRSYVRNIYTEAGNAILSGTTDIAPYKIKKQAACTFC
PFRSVCQFDQSMEENNYRLIHPEKPEEILAKMRKERRTDENSHSG
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgacttttttatcggaaacacggcttgcgcatgaacctgaactgggcgggatgatccgt
gcccaggtgtacagttttacgcgccttgcctggaaaatattgcaggaagtcggcgggatc
agccgtacccatgtatcgagcagcggattaaatatgctcattcggaaaattttggaagac
caaaaagaagaactgtcggttttcacgcgggcggcggataagacgggctttattgacaat
gtcgaacgcattctgactgagttcaaacggttttgcgtctcgcccgcacagcttcaggaa
aaacgcgcctcaatcagggaagcggacgggggaagagtgctttccgacaagctgcacgat
ttggaacgcgtatatcaggcatatgagcaaaagctggaaggcaaatacattgattcagaa
gattacttgaggctgcttgcttctgccgttgaaaaatcccgctatctggacgatgcggaa
atttatatagatgggttccatacttttaacccgcaggaatacttggtgatcggggaactc
ttgaaaaaatgccgccgcgttacggttgcgctcacaacggaccgggctttccgcgggagg
cagccggatgatttatacttgttccggatgccgggagaagcctatgcacatatctatgaa
ctggcgcgcgcctttcaaattgaaacggaagaagacgtggcgctgtatgaaccggcccgt
ttcaggcatgaaagtttgcgttttttgcagtcccggtttgaagaactgccgtttcctact
tttctgggggaaagcagcatcgagatctggcaggcgaacaaccggcgggcggaaatcgaa
ggcgttgcccgttctatccgtgaagccgtcatggaaggcagctgccgttaccgtgatatt
gccatccttgtccgcaacggggaggcctatcaggatttaatcgaaacggttttttacgat
tatgatgtgccgtattttatcgacagaaaacggccgatgctgaaccatccgctcattgaa
ctgatccgttcgactttggaaatcatccgcggcaactggcgttatgaaccggttttccgt
gccatcaaaacagaattgctgtttccgcctggagatgcccgcacgttgcgtgaaaaaatg
gaccggcttgaaaactattgcctggcttacggcatccagggagaacgctggacgagcaga
aaaagatgggaatataggcggatccgcggccttgaactggaaaaccttccgcaaacggat
gaggaaagaaaaatcgaacaggaactgaatgaactcaggcttctggtcacagcgccgatt
ttgcgcctgtcgcggcgtttgaagcgcgcccgcaccggaaaagcgctttgcgaagcgttg
tatctttatctcgaagaattggagattccggaaaaactggaagcgctccggcttgaaaag
gaagaagcgggggatcttgttgctgccagggaacacgaccaggcatgggatgaagtcatg
ggcgttttggaccagtatgttgaaatccttggcgatgaacctgctgatgttgggaaattc
tctgccattatggaaaccgggcttgagtcattaaaattttccattgttccaccggctttg
gaccaggtgctcgtagcgaatctggaacagtcccggctgtccgatgtcaaactggcgttt
atcattggggtcaatgacggggtcatgccggcgaaaatttccgaagatggcgttttaaat
gatgaagagcgtgaatatttaaggcttaccgggcttgaaatcatgcccggcagcaaaagg
cgcctgctggacgaagaatttattttctaccgggcattgacgacgccgtctgaaaaactg
gttctctcttttccgcttgccgatgaggaagggaaagcattgctgccgtccccgttcatc
aaccggatagaggacatgttcccggcccgcggcggcggattatgggtaaatgacccggcg
gaactggaagagaaacagcaagccgcatacatttcccatccggcggctgctattgctttt
gtcacttcgcagctgcagctgaaaaaaagagggtatcccatggccggcttctggtgggat
acgtataacttctatatggagaacccggaatggaaaaaccgggcggcccatgctttttcc
agtttgttttaccaaaacaaagcccggaagctctccgaaaaaacgagccgggaactgtac
ggcgaccatatccttgccagcgtatcgagaatggagcagtttttcacctgcccgttttcc
catttttcgacatacgggctgaggctgcgggaacgggatgtgttccgccttgatgcgccg
aatatcggggatcttttccacggcgcattgaaatggatttccgacacactgcagcgcgaa
ggcattccgtggtcagagatgacaaagcagcaaagcatggagcttgcaaaagcggcagtg
gacgaccttgccccaaaattgcagcatcaaatcctgctcagttcgaaacgctaccaatat
attaaaaggaaactggaacaggttgtcggaagggcttcttatattttaagcgtccatgcg
aaacgaagcggctttgaaccggtcgcgatggaactcgctttcgggccgaaaaaagagctt
ccgccgctttcatttacattgaaaaacggggcgaaaatggagctgcagggccggattgac
cgtgtcgacaaggcagaaagcgaaaacggtgtgtacgtcaggatcatcgattacaaatca
agcgcgcacaagcttgatttgacaaatgtgtattacggtcttgacctgcaaatgctcacc
tatctggatctcattatgacgtattcgaaacagctgacaggtgaagaaacgattccggcg
ggcgttttgtatttccatcttcatgatccgctgatttcggcggaaaaaatgctgacggct
gaagaaattgaagaagaaattttaaaagacttccggatgcgggggctgttgctggacagc
ccggaagtgatcacattgatggaccagtcgcttgaatccggcaacagtgcgattgtgtcg
gcaggtttgaaaaaggacggccaattaacggcccggtccgaagtggcaagcaaagaagac
tttgaagcgatccgcagctatgtgcgcaacatttacacagaggccggcaatgcgatcctg
tccggcacgacggatatcgcgccttataaaataaaaaaacaggcggcgtgcacattctgc
ccgttccgttcagtctgccagtttgaccagtcgatggaagagaacaattaccgcctcatt
cacccggaaaaaccggaagaaattctcgccaaaatgagaaaggagcgcagaacagatgaa
aacagccattccggataa
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