Heyndrickxia coagulans 2-6: BCO26_1181
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Entry
BCO26_1181 CDS
T01527
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bck
Heyndrickxia coagulans 2-6
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bck03016
]
BCO26_1181 (truB)
Enzymes [BR:
bck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BCO26_1181 (truB)
Transfer RNA biogenesis [BR:
bck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BCO26_1181 (truB)
Prokaryotic type
BCO26_1181 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEH53240
LinkDB
All DBs
Position
1232690..1233592
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AA seq
300 aa
AA seq
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MDGILPLWKPAGMTSHDCVFKIRKLFGTKKAGHTGTLDPDVEGVLPVCIGRATKIAEYLQ
DAGKTYEGEATIGVSTTTEDASGDIIEKKEIGRPISREEILAALASLTGHITQIPPMFSA
VKVNGRRLYEYARAGIEVERPKRDVEIYSLELLDGRECFEGPVVSFRFRASCSKGTYIRT
LAVMIGEKLGYPAHMSNLTRTEAGGFSKEQCATFQEIEKAVETGIKESLLFPLEAGIRHL
PKWEISDTLAEKVKNGAVLKKPETWPETGDRLAVFFRGKMLAVYVAYPGRPGFIKPAKVL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatggtattttaccgctctggaaaccggcggggatgacctcccatgactgtgttttt
aaaatccggaagcttttcggcacaaaaaaagcaggccataccggcacgcttgatccggat
gtggaaggggtgctcccggtttgcatcgggcgtgcgacaaagattgccgaatatcttcag
gatgccggcaaaacttacgaaggcgaagcaacgatcggggtttcaacgacgacagaggat
gcttccggcgacatcattgaaaaaaaagaaattggccggccgatcagccgggaagaaatt
ttagccgcactcgcttcgcttaccgggcatattacccaaatcccgccgatgttttccgcc
gtcaaagtgaacgggagaaggctgtatgaatatgcgcgggcgggcatcgaagtggaacgc
cctaaaagggatgtggaaatctacagccttgaactattggacgggcgggaatgttttgaa
gggccggttgtatcgttccgtttccgcgcttcatgcagcaaagggacgtatatccgcacg
cttgctgttatgatcggggaaaagctcggctatcccgcacatatgtccaatcttacaaga
acggaagccggcggtttttcaaaggaacaatgcgccacatttcaggagatcgaaaaagcc
gtggaaacaggcatcaaggaaagcctgctcttcccgctggaggccgggatccgccatttg
ccgaaatgggaaattagtgatacattagcagagaaagtaaagaacggtgccgtgttgaaa
aaaccggagacttggccggaaacgggagacaggcttgctgtctttttccgcggaaaaatg
ctcgcggtatacgtggcgtatcccggccggcccggctttatcaaaccggcgaaagtgttg
taa
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