Heyndrickxia coagulans 2-6: BCO26_1410
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Entry
BCO26_1410 CDS
T01527
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bck
Heyndrickxia coagulans 2-6
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bck03000
]
BCO26_1410
Transcription factors [BR:
bck03000
]
Prokaryotic type
Helix-turn-helix
Other families
BCO26_1410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_50
HTH_23
Xre-like-HTH
HTH_30
AAA_16
HTH_28
AAA_22
AAA_19
GAF_2
UBA
Motif
Other DBs
NCBI-ProteinID:
AEH53469
LinkDB
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Position
1466824..1468656
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AA seq
610 aa
AA seq
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MAVCYWNTWKKFVQEGTLDPERINNRIAESWYRCKKRDVNPYLRKGQHILPVEKLLAHRE
RHKDFLNIAERHVKKMEPVFQEAGMMALLIDPCGHVLSVSGNRKTIFEAQKINFVEGVCW
TEERVGTNAIGTALETGEAVMVNGPEHFSVASHQWSCAAAPVYDSQRNLVGVMDLTCPYT
ESHPFMLAMVSSLAYTAEQEMVRMAKSRHERFIQKAVELSDQYGDRLLAITDEEGKTVAA
SRPLRKKLPDYFGRTIEELTSQTDTIVNQSIPLPSSREKIGTCFFLSENKNLSGTLLPKE
RFVFRGVTGISKSFQETLRKARIASLSDTTCFITGETGTGKELVARAIHENSSRKNGPFI
AVNCGAVPKELMESEFFGYADGAFTGAKRGGHKGKFEQAHGGTLFLDEVAELPPAMQTAL
LRVLQDRKVVPVGAIKEVAVDVRIIAATHKDLPKLVKEGKFREDLFYRLYVFPVRLPALR
ERKEDLPALIQYIGRKKNQDFEIPPAVLKKMQDYHWPGNIRELMNVIENVRLLALAGEEE
VERYVDEYVSGQTGLCDKEKQDAPLTPREAIERDMILEALKHTKGNAAAAAKMLDIPRST
FYRKLRKYGL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatgttattggaatacgtggaaaaagtttgtgcaggaagggacattggatccc
gagagaatcaacaaccgaatcgctgaatcgtggtaccgctgtaaaaaacgggatgttaac
ccctatttgcggaaagggcagcatatcctaccggttgaaaaactattggcacaccgggaa
cggcataaagattttttgaatattgccgaacgccatgtgaaaaagatggagcctgtgttt
caggaagctggcatgatggcgctcctgattgatccttgcgggcatgtgctgtccgtatca
ggaaaccggaaaaccatttttgaagcacaaaaaattaattttgtcgaaggggtttgttgg
acggaagagcgggtcggcacgaatgcgatcggcactgcgcttgagacgggggaagccgtg
atggtgaacggccctgagcatttctcggttgcctcccaccagtggagctgtgcggctgcg
ccggtttacgacagccaaaggaatcttgttggcgtcatggacttaacatgcccgtatacc
gaatcccaccctttcatgctcgccatggtttcatcgctcgcttatacagcagagcaggaa
atggtacgcatggcaaaaagccggcatgaacgtttcatccaaaaggctgttgaactttcg
gaccagtacggggaccggttactcgccattacggatgaagaaggaaaaaccgtggcggca
agccggccgctccggaagaaattgccggattattttggcagaacgattgaagaattgacc
tcccaaacggataccattgtaaaccaatccattccattgccttccagccgggaaaaaatc
ggcacttgtttctttttatctgaaaataaaaatctgtctggcacccttcttccaaaagaa
aggttcgtcttccgcggcgtcaccggcataagcaaaagttttcaggaaacgttgcgcaaa
gcccggattgcctccctttctgataccacttgttttatcacgggtgagaccgggacagga
aaggagctggtcgcacgtgccatccatgaaaacagtagccggaaaaacggcccgtttatt
gccgtcaattgcggggctgtgccgaaagaattaatggaaagcgagtttttcggttatgcc
gacggggcgtttaccggcgcaaaacggggcggccataaaggaaaattcgagcaggcccat
ggcggaaccttatttcttgacgaagtggccgagctgccgcctgccatgcaaacggcgcta
ctccgcgtcctgcaggatagaaaagtcgtgccggttggtgctataaaagaagtggctgtg
gacgtccggatcattgccgcgacccacaaggatttgccgaagctcgtcaaagaagggaag
ttccgtgaagacttgttttaccgcctgtatgtttttcccgtccgccttcctgccttgcgc
gaaagaaaagaagacttgcctgctttgattcagtatatcggcaggaagaaaaatcaagac
ttcgaaatcccgccggcggttttgaaaaaaatgcaggattatcattggcccggcaatatc
cgcgaactgatgaatgtgatcgaaaatgtgcggctgcttgcactggccggtgaagaagaa
gtggaacggtatgtggacgaatatgtttccgggcagaccgggctttgcgacaaagaaaaa
caggacgcgccgctgaccccgcgggaagcgattgagcgcgatatgatcctggaagctttg
aaacatacgaaaggaaatgcggcggcagcggcgaaaatgctggatattccgcgcagcaca
ttttacaggaaactgcggaaatacggcctgtaa
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